Perl *PIPERs
Jitendra Narayan 4624 days ago
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Genome assembly tutorial "Genome Assembly for short and long reads"
By Jit 2604 days ago Comments (1)bioinformaticsdotca.github.io - In this lab we will perform de novo genome assembly of a bacterial genome. You will be guided through the genome assembly starting with data quality control, through to building contigs and analysis of the results. At the end of the lab you will...Genome assembly training tutorial at Galaxy !
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Clean the FASTA file
By Jit 4538 days agoMostly FASTA file contain NNN characters, which can be replace by random A T G C character with this perl script. It also print the FASTA sequence name, N's counts, nucleotide count and percentage details at command prompt/standard output.
Perl One liner basics !!
Last updated 3940 days ago by Abhimanyu SinghPerl has a ton of command line switches (see perldoc perlrun), but I'm just going to cover the ones you'll commonly need to debug code. The most important switch is -e, for execute (or maybe "engage" :) ). The -e switch takes a quoted string of Perl...-
Frequent words problem solution by Perl
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ICRISAT is a non-profit, non-political organization that conducts agricultural research for development in Asia and sub-Saharan Africa with a wide array of partners throughout the world. Covering 6.5 million square kilometers of land in 55...Perl way to check if an array contains values
By Shruti Paniwala 3285 days agoCheck of array contain a string or number in it
