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Genobuntu: Package for Next Generation Sequencing and Genome Assembly
By BioStar 1651 days agosourceforge.net - Genobuntu is a software package containing more than 70 software and packages oriented towards NGS. In its current version, Genobuntu supports pre assembly tools, genome assemblers as well as post assembly tools.Commonly used biological software and...MitoFinder
By Neel 453 days agogithub.com - Allio, R., Schomaker-Bastos, A., Romiguier, J., Prosdocimi, F., Nabholz, B., & Delsuc, F. (2020) Mol Ecol Resour. 20, 892-905. (publication link) Mitofinder is a pipeline to assemble mitochondrial genomes...Reference Sequence Resource!
By LEGE 1166 days agowww.encodeproject.org - The ENCODE project uses Reference Genomes from NCBI or UCSC to provide a consistent framework for mapping high-throughput sequencing data. In general, ENCODE data are mapped consistently to 2 human (GRCH38, hg19) and 2 mouse...Peregrine & SHIMMER Genome Assembly Toolkit
By Abhi 1074 days agogithub.com - Peregrine is a fast genome assembler for accurate long reads (length > 10kb, accuracy > 99%). It can assemble a human genome from 30x reads within 20 cpu hours from reads to polished consensus. It uses Sparse HIereachical MimiMizER (SHIMMER)...Comparative Genomics Workshops !
By Rahul Nayak 1034 days agowww.genome.gov - This meeting's objective was to obtain a big picture look at the current state of the field of comparative genomics with a focus on commonalities across genomic investigations into humans, model organisms (both traditional and...Environmental Genomics Group SciLifeLab/KTH Stockholm
By BioStar 724 days agohttps://github.com/envgen - Useful Metagenomics resourcesNCBI Datasets pages
By BioStar 501 days agoAssembly and Genome record pages now redirect to new NCBI Datasets pages.Opening for RA/extended SRF in Bioinformatics project by DBT at Bose Institute
The institute has evolved over the years into a multi-disciplinary research organization with stress on fundamental research in its pursuit of advancement of knowledge in Science and technology and at the same time developing highly competent and...Entire Human Genome Sequencing !
By LEGE 236 days agoCost-effective whole human genome sequencing has revolutionized the landscape of genetic research and personalized medicine by making comprehensive genetic analysis accessible to a wider population. Through advancements in sequencing technologies,...Research Associate Biotechnology/JRF/Lab. Assistant Indian Institute of Vegetable Research (IIVR)...
F. No.: 2-19/2011-Adm.I Research Associate Biotechnology /JRF / Lab. Assistant recruitment in Indian Institute of Vegetable Research Project: Genomics assisted selection of Solanum chilense introgression lines for enhancing drought...
