R and Bioconductor
Jitendra Narayan 4776 days ago
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Next generation sequencing in R or bioconductor environment
Last updated 4448 days ago by John Parker Comments (3)There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced environment for efficient sequence management and analysis in R. It...
Bioinformatics algorithms tutorials
By John Parker 4427 days agowww.homolog.us - Useful bioinformatics tutorial, such as De Bruijn Graphs for NGS AssemblyAlgorithms for PacBio ReadsSoftware and Hardware Concepts for BioinformaticsFinding us in Homolog.us (Search Algorithms)NGS Genome and RNAseq Assembly - a Hands on...BINC examination 2015 !!!
By Jitendra Narayan 4238 days ago Comments (1)Registration for BINC examination 2015 will open soon.Pacman
By Rahul Nayak 4189 days agoThe pacman package is an R package management tool that combines the functionality of base library related functions into intuitively named functions.
BINC Sample Question Paper !!!
By Jitendra Narayan 4130 days agoBINC sample question paper round THREE ...-
Reverse Complement Problem Solved with Perl
Last updated 4076 days ago by JitQuestion at http://rosalind.info/problems/1b/ #Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return: Pattern, the reverse complement of Pattern.use strict;use warnings;my $string="AAAACCCGGT";my $finalString="";my %hash... BUSCO
By Jitendra Narayan 3833 days agohttp://busco.ezlab.org/ - Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs More at http://busco.ezlab.org/CrossMap
By Jitendra Narayan 3832 days agocrossmap.sourceforge.net - CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different assemblies (such as Human hg18 (NCBI36) <> hg19 (GRCh37), Mouse mm9 (MGSCv37) <> mm10 (GRCm38)). It supports most commonly...
