23andMe’s mission is to help people access, understand, and benefit
from the human genome. We are a group of passionate individuals excited
to push the boundaries of what’s possible to help turn genetic insight
into better health and personal...
bioinf.spbau.ru - Ultimate tool for resolving repeats in genome assemblies.
Though the specific implementation of the idea of the rectangle graph approach is already included into the current SPAdes distribution, we're also releasing the Rectangle Graph Module...
National Agri-Food Biotechnology Institute
ADVT. No: 2017-Researcher (02)
JRF/SRF / Project Assistant-II recruitment in National Agri-Food Biotechnology Institute (NABI)
Essential Qualification: According to the DST (DST OM No.SR/S9/Z-09/2012...
github.com - MARVEL consists of a set of tools that facilitate the overlapping, patching, correction and assembly of noisy (not so noisy ones as well) long reads.
The assembly process can be summarized as follows:
overlap
patch reads
overlap...
www.animalgenome.org - The Blast Extension and Assembly Program (BEAP) is a computer program that uses a short starting DNA fragment, often a EST or partial gene segment, as "primer", to recursively blast nucleotide databases in an attempt to obtain all sequences that...
Perl's second wave of adoption came from the growth of the world wide web. Dynamic web pages—the precursor to modern web applications—were easy to create with Perl and CGI. Thanks to Perl's ubiquity as a language for system...
www.zhanyuwang.xin - BAUM, breaks the whole genome into regions by adaptive unique mapping; then the local OLC is used to assemble each region in parallel. BAUM can: (1) perform reference-assisted assembly based on the genome of a close species; (2) or improve the...
The purpose of this cheat sheet is to introduce biologist and bioinformatician to the frequently used tools for NGS analysis as well as giving experience in writing one-liners.
File System ls — list items in current directory ls...
Reference-free prediction of rearrangement breakpoint reads | Bioinformatics | Oxford Academic
https://academic.oup.com/bioinformatics/article/30/18/2559/2475628 Reference-free SNP detection: dealing with the data...