github.com - HapCUT2 is a maximum-likelihood-based tool for assembling haplotypes from DNA sequence reads, designed to "just work" with excellent speed and accuracy. We found that previously described haplotype assembly methods are specialized for specific read...
ml.ssu.ac.kr - gSearch compares sequence variants in the Genome Variation Format (GVF) or Variant Call Format (VCF) with a pre-compiled annotation or with variants in other genomes. Its search algorithms are subsequently optimized and implemented in a...
Karpagam University, Coimbatore, Recruitment of Sr. Prof, Prof, Associate and Assistant Professors
Name of the College: Karpagam University, Coimbatore
Date of official publication: 15th April 2015
The newspaper wherein this job advertised:...
github.com - indexcov, an efficient estimator of whole-genome sequencing coverage to rapidly identify samples with aberrant coverage profiles, reveal large-scale chromosomal anomalies, recognize potential batch effects, and infer the sex of a...
sourceforge.net - EXCAVATOR, for the detection of copy number variants (CNVs) from whole-exome sequencing data. EXCAVATOR combines a three-step normalization procedure with a novel heterogeneous hidden Markov model algorithm and a calling method that classifies...
github.com - mosdepth can output:
per-base depth about 2x as fast samtools depth--about 25 minutes of CPU time for a 30X genome.mean per-window depth given a window size--as would be used for CNV calling.the mean per-region given a BED file of regions.a...
F.No. 4-59/2013-NIHSAD Dated: 21st April, 2015
SRF/ JRF job vacancies in National Institute of High Security Animal Diseases (ICAR)
Name of Post : JRF
No. of Post : 01
Qualification : M.V.Sc or M.Tech./M.Sc. (preferably with NET...