github.com - Key features
Filters SNVs from any variant caller to remove false positives
Calculates metrics based on BAM files and provides filtering not possible with other tools
Fully user-configurable filtering (including which filters to use and their...
Rosalind is a platform for learning bioinformatics and programming through problem solving. Take a tour to get the hang of how Rosalind works.
Bioinformatics Textbook Track
Find more about Rosalind puzzle at...
GATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...
Applications are invited from Indian nationals for the post of Research Assistant (on contract) in research project entitled “Identification of novel drug targets in Aspergillus fumigatus genome prioritized by essentiality based screening and...
github.com - VariantBam is a tool to extract/count specific sets of sequencing reads from next-generational sequencing files. To save money, disk space and I/O, one may not want to store an entire BAM on disk. In many cases, it would be more efficient to store...
Research Associate
International Centre for Genetic Engineering and Biotechnology (ICGEB)
Address: Aruna Asaf Ali Marg, Jawaharlal Nehru University, New Delhi
Postal Code: 110067
City: New Delhi
State: Delhi
Qualifications: Experience in many...
github.com - jackalope simply and efficiently simulates (i) variants from reference genomes and (ii) reads from both Illumina and Pacific Biosciences (PacBio) platforms. It can either read reference genomes from FASTA files or simulate new ones. Genomic variants...
Research Associate Statistics
Eligibility : M Phil / Phd, MSc
Location : Delhi
Last Date : 27 Jun 2015
Hiring Process : Walk - In
Indian Agricultural Statistics Research Institute (IASRI) - Job DetailsDate of posting:03 Jun...
console.cloud.google.com - List of publically available databases on google server.
More at https://software.broadinstitute.org/gatk/download/bundle
ftp://ftp.ncbi.nlm.nih.gov/snp/organisms/human_9606/VCF/GATK/.
ftp://ftp.broadinstitute.org/bundle/hg38/hg38bundle/
Research Associate Position at ICGEB, New Delhi with Dr. Amit Sharma
Starting 15th July 2015, the position relates to a project specifically for in silico drug docking, screening, design, optimisation and linkage with active chemists....