Jit
Enthusiast computational biologist with business dream !!!
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WALK-IN-INTERVIEW FOR PROJECT ASSISTANT @ BHARATHIDASAN UNIVERSITY
BHARATHIDASAN UNIVERSITY DEPARTMENT OF BIOINFORMATICS, SCHOOL OF LIFE SCIENCES, TIRUCHIRAPPALLI – 620024 Project title: “Genome-scale metabolic modeling and simulation of rumen methanogens An in silico attempt to methane attenuation” Funding...HALC: High throughput algorithm for long read error correction
By Jit 2927 days ago Comments (1)github.com - HALC, a high throughput algorithm for long read error correction. HALC aligns the long reads to short read contigs from the same species with a relatively low identity requirement so that a long read region can be aligned to at least one contig...Linux operating system aimed at scientists
By Pranjali Yadav 4163 days agoBio-Linux, a fully-featured, powerful, configurable, and easy to maintain bioinformatics workstation built on the Ubuntu operating system, has been upgraded to version 8.0.5 and is now available for download.nanofilt: Filtering and trimming of long read sequencing data
By Jit 2875 days ago Comments (1)github.com - Filtering on quality and/or read length, and optional trimming after passing filters.Reads from stdin, writes to stdout. Intended to be used: directly after fastq extraction prior to mapping in a stream between extraction and...BASE: a practical de novo assembler for large genomes using long NGS reads
By Rahul Nayak 2795 days agogithub.com - new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high probability to appear uniquely in the genome. Such seeds form the basis for BASE...RA Bioinformatics at CIBA
The following posts are to be filled purely on temporary basis under CIBA Component of “Centre for Agricultural Bioinformatics (CABin)” project at this Institute. Research Associate – one post Date & Time of Interview 18th Feb 2015 at...nQuire: A statistical framework for ploidy estimation using NGS short-read data
By Jit 2691 days agogithub.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...JRF in Bioinformatics @ Tezpur University
Applications are invited for one temporary position of Junior Research Fellow (JRF) in the DBT Twinning Project entitled ‘In-Silico design and evaluation of sequences for γD crystalline protein’ under the Principal Investigator Dr. Anupam Nath Jha,...gapFinisher: A reliable gap filling pipeline for SSPACE-LongRead scaffolder output
By Rahul Nayak 2333 days agogithub.com - gapFinisher is based on the controlled use of a previously published gap filling tool FGAP and works on all standard Linux/UNIX command lines. They compare the performance of gapFinisher against two other published gap filling tools PBJelly and...RA / Research Associate Bioinformatics/Computational Biologist
The following posts are urgently required to be filled for the Department of Biotechnology, Government of India funded project entitled "Computational Core for Plant Metabolomics" administrated by Prof Indira Ghosh, School of Computational and...
