Jit
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ChopStitch: exon annotation and splice graph construction using transcriptome assembly and whole...
By Rahul Nayak 3020 days agogithub.com - ChopStitch is a new method for finding putative exons and constructing splice graphs using an assembled transcriptome and whole genome shotgun sequencing (WGSS) data. ChopStitch identifies exon-exon boundaries in de novo assembled RNA-seq data with...RA Bioinformatics at CIBA
The following posts are to be filled purely on temporary basis under CIBA Component of “Centre for Agricultural Bioinformatics (CABin)” project at this Institute. Research Associate – one post Date & Time of Interview 18th Feb 2015 at...PureCN: copy number calling and SNV classification using targeted short read sequencing
By Jit 2983 days agobioconductor.org - This package estimates tumor purity, copy number, and loss of heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by somatic status and clonality. PureCN is designed for targeted short read sequencing data, integrates well with...JRF in Bioinformatics @ Tezpur University
Applications are invited for one temporary position of Junior Research Fellow (JRF) in the DBT Twinning Project entitled ‘In-Silico design and evaluation of sequences for γD crystalline protein’ under the Principal Investigator Dr. Anupam Nath Jha,...VariantBam: Filtering and profiling of next-generational sequencing data using region-specific rules
By Rahul Nayak 2926 days agogithub.com - VariantBam is a tool to extract/count specific sets of sequencing reads from next-generational sequencing files. To save money, disk space and I/O, one may not want to store an entire BAM on disk. In many cases, it would be more efficient to store...RA / Research Associate Bioinformatics/Computational Biologist
The following posts are urgently required to be filled for the Department of Biotechnology, Government of India funded project entitled "Computational Core for Plant Metabolomics" administrated by Prof Indira Ghosh, School of Computational and...NanoPack: visualizing and processing long-read sequencing data
By Jit 2844 days agogithub.com - The NanoPack tools are written in Python3 and released under the GNU GPL3.0 License. The source code can be found at https://github.com/wdecoster/nanopack, together with links to separate scripts and their documentation. The scripts are compatible...How to Prepare your Bioinformatics CV ?
By Neel 4260 days ago Comments (1)Preparing a bioinformtatics CV is also an art as well as a requirement for a person applying for a job .jackalope: A swift, versatile phylogenomic and high-throughput sequencing simulator
By Abhimanyu Singh 2632 days agogithub.com - jackalope simply and efficiently simulates (i) variants from reference genomes and (ii) reads from both Illumina and Pacific Biosciences (PacBio) platforms. It can either read reference genomes from FASTA files or simulate new ones. Genomic variants...Bioinformatics Project Assistant at Pune University
Pune University Recruitment 2015 – Project Asst Posts: Savitribai Phule Pune University has given a notification for the recruitment of Project Assistant vacancies for the project entitled “Molecular Characterization of Organisms for Therapeutic...
