Jit
Enthusiast computational biologist with business dream !!!
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The "Ifs" and "Buts" of NGS Quality Control and Trimming
By BioStar 528 days agoNGS quality control and trimming are essential steps to ensure reliable and accurate data for analysis. While the "ifs" highlight the clear benefits of these steps, the "buts" remind us of the potential pitfalls. By adopting best practices and...JRF @ PONDICHERRY UNIVERSITY
PONDICHERRY UNIVERSITY CENTRE FOR BIOINFORMATICS PUDUCHERRY Applications are invited for one Project Assistant to work in the UGC sponsored Research Award "Molecular Docking and Dynamics studies to understand the interacting mechanism of...
My commonly used commands in Bioinformatics
Last updated 2881 days ago by Rahul NayakFYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually: minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta...FACULTY POSITIONS AT IIIT-ALLAHABAD
OPENINGS OF FACULTY POSITIONS AT IIIT-ALLAHABAD (Under Tenure-Track Model) Open Advt. No IIITA/DIC/16012014 IIIT-Allahabad has several Openings for the Faculty positions at the Assistant Professor level. It is a regular tenure-track...Referee: Genome assembly quality scores
By Jit 2779 days agogwct.github.io - Modern genome sequencing technologies provide a succint measure of quality at each position in every read, however all of this information is lost in the assembly process. Referee summarizes the quality information from the reads that map to a site...Post-doctoral Research Assistant in Genetics
Post-doctoral Research Assistant in Genetics Camden, North London £31.1K per annum inclusive of London Weighting This is a fixed term post for 36 months. We wish to recruit a highly motivated, postdoctoral scientist to carry out a BBSRC...jackalope: A swift, versatile phylogenomic and high-throughput sequencing simulator
By Abhimanyu Singh 2516 days agogithub.com - jackalope simply and efficiently simulates (i) variants from reference genomes and (ii) reads from both Illumina and Pacific Biosciences (PacBio) platforms. It can either read reference genomes from FASTA files or simulate new ones. Genomic variants...Scientist Positions at Rajiv Gandhi Centre for Biotechnology
Rajiv Gandhi Centre for Biotechnology An Autonomous National Institute under Government of India, Ministry of Science & Technology Department of Biotechnology No: RGCB/ Advt./2014/1 January 24, 2014 Scientist Positions Group...Kevler: Reference-free variant discovery in large eukaryotic genomes
By Jit 2330 days agogithub.com - Welcome to kevlar, software for predicting de novo genetic variants without mapping reads to a reference genome! kevlar's k-mer abundance based method calls single nucleotide variants (SNVs), multinucleotide variants (MNVs),...C-DAC launch supercomputing facility "Param Bio Blaze" !!!
By Rahul Nayak 4499 days agoParam Bio Blaze, a supercomputing facility, to address the challenges in bioinformatics on Tuesday at a three-day symposium.
