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Evaluation of genome assembly software based on long reads
By BioStar 2263 days agoTGS technologies have been used to produce highly accurate de novo assemblies of hundreds of microbial genomes and highly contiguous reconstructions of many dozens of plant and animal genomes, enabling new insights into evolution and sequence...
Linux SSH Client Commands for Bioinformatics
Last updated 4049 days ago by Rahul NayakHere come on let play with the following basic command line usage of the ssh client.1. Check your SSH Client Version:Checking for your SSH client is very sare, but sometimes it may be necessary to identify the SSH client that you are currently...
Apollo: First instantaneous, collaborative genomic annotation editor available on the Web
By Jit 2144 days agogenomearchitect.github.io - Apollo is a plug-in for the JBrowse Genome Viewer. In addition to genes and pseudogenes, users can annotate ncRNAs (snRNA, snoRNA, tRNA, rRNA), miRNAs, repeat regions, and transposable elements; each annotation type has its own...Basic Notions in Molecular Biology and Genetics
By Antony Campos 4046 days agoThis is a presentation about some fundamental concepts applied in molecular biology and genetics, also it contains a little bit of the experience that one of our members has gained in his years of undergraduate state related to molecular cloning....simuG: a general-purpose genome simulator
By BioStar 1963 days agogithub.com - Simulated genomes with pre-defined and random genomic variants can be very useful for benchmarking genomic and bioinformatics analyses. Here we introduce simuG, a lightweight tool for simulating the full-spectrum of genomic variants (single...Gerstein Lab
The focus of the Gerstein Lab is interpreting personal genomes, particularly in relation to disorders, such as cancer. This endeavor has a number of related aspects described below. Moreover, the approaches we take have broad connections to a...Bioinformatics PhD at University of Calcutta
University of Calcutta Department of Biophysics, Molecular Biology & Bioinformatics Applications are invited for admission to the Ph.D. programme in the Department of Biophysics, Molecular Biology & Bioinformatics, University of Calcutta...Phylogenomics/Phylogenetic website
By Aaryan Lokwani 4024 days agohttp://phylobabble.org/ - Welcome to phylobabble.org, a discussion forum for phylogenetic theory and applications. The primary goal of this forum is to discuss best practice and new developments in phylogenetics. Although we do have a Troubleshooting category for getting...China’s BGI says it can sequence a genome for just $100
By Neel 1870 days ago Comments (6)China’s BGI says it can sequence a genome for just $100
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