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C-DAC launch supercomputing facility "Param Bio Blaze" !!!
By Rahul Nayak 3961 days agoParam Bio Blaze, a supercomputing facility, to address the challenges in bioinformatics on Tuesday at a three-day symposium.Purge Haplotigs: Pipeline to help with curating heterozygous diploid genome assemblies
By Rahul Nayak 2198 days agobitbucket.org - Some parts of a genome may have a very high degree of heterozygosity. This causes contigs for both haplotypes of that part of the genome to be assembled as separate primary contigs, rather than as a contig and an associated haplotig. This can be an...Atlas of ancient inter-ethnic group !!!
By Jit 3965 days agoDNA samples of living people infer the ancient biological relationship ...GenomeView: genome browser and annotation editor
By Rahul Nayak 2182 days agosourceforge.net - GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded.This project has...Computational Biologist Scientist @ Strand Life Sciences
We are looking for a motivated application scientist to help evaluate, compare, and develop next generation sequencing (NGS) data analysis methods. The successful candidate should be able to quickly understand the state-of-art computational biology...List of tools frequently used while genome assembly
By BioStar 2162 days agoTo decide which strategy should be our “preferred” genome assembly approach based on data rather than my gut-feeling about the “best assembly” I decided to do some testing with a known “true” reference E Coli K12 MG1655The Rogers Lab
The Rogers lab studies evolution of genome structure. We explore the ways that complex mutations like duplications, deletions, rearrangements, and retrogenes can create new genetic material. We study how these new mutations are important for...Postdoc Position in Computational Biology
The Computational Biology Group of Interdisciplinary Center for Clinical Research (IZKF) Aachen, RWTH Aachen University Hospital, Aachen, invites applicants for PhD candidate or postdoctoral position in computational biology in one of the...ALF--a simulation framework for genome evolution.
By Jit 1888 days agohttp://alfsim.org/#index - Artificial Life Framework (ALF) simulates a root genome into a number of related genomes. Result files include the resulting gene sequences, true tree and true MSAs. A description of ALF can be found in the following article: Daniel A Dalquen,...
