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A Brief Bioinformatics Tutorial
By Jit 3872 days ago Comments (4)www.mrc-lmb.cam.ac.uk - This is about how to use a computer to find what is known about a gene of interest and also how to get new insights about it. The tutorial is divided in three main parts: In the Sequence part, you will see how to look efficiently for a...Comparative genomics visualisation tools !
By Neel 1043 days agocmdcolin.github.io - Comparative genomics visualisation tools !Bioinformatics JRF/SRF position at NII
NATIONAL INSTITUTE OF IMMUNOLOGY, NEW DELHI-110067 Applications are invited for the position of Senior Research Fellow for the following time-bound sponsored project as per the details given below: 1. BTIS project on, “Bioinformatics...GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
By Neel 952 days agogithub.com - The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is...Bioinformatics JRF vacancy at ICGEB, New Delhi
Junior Research Fellow for a DBT sponsored project entitled "Computational and experimental characterization of stage specific arginine methylation in P. falciparum proteome". Candidates should have a 1st class MSc/MTech/BTech degree in...MitoHiFi: a python pipeline for mitochondrial genome assembly from PacBio high fidelity reads
By Abhi 478 days agogithub.com - MitoHiFi v3.2 is a python pipeline distributed under MIT License ! MitoHiFi was first developed to assemble the mitogenomes for a wide range of species in the Darwin Tree of Life Project...
Linux Sort Commands for Bioinformatics
Last updated 3862 days ago by Rahul NayakAlmost all the scripting languages such as Perl, Python etc have built-in sort, but unfortunately none of them are as flexible as sort command. But one when it come to space efficiency GNU sort stands at the top. It can sort a 20Gb file with less...quarTeT: a telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat...
By Abhi 201 days agowww.atcgn.com - quarTeT is a collection of tools for T2T genome assembly and basic analysis in automatic workflow.Task include: AssemblyMapper : reference-guided genome assembly GapFiller : long-reads based gap filling TeloExplorer : telomere...-
Next generation sequencing in R or bioconductor environment
Last updated 3860 days ago by John Parker Comments (3)There are many R software and bioconductor packages for NGS data analysis, some of them are as follows Biostrings The Biostrings package from Bioconductor provides an advanced environment for efficient sequence management and analysis in R. It... 320000 viruses in mammals yet to sequenced in future!!!
By Rahul Agarwal 4132 days ago70 per cent of emerging viral diseases such as HIV/AIDS, West Nile, Ebola, SARS, and influenza, are zoonoses - infections of animals that cross into humans.
