github.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...
SCHOOL OF CHEMISTRY, UNIVERSITY OF HYDERABAD
Applications on plain paper along with details of CV (relevant photocopies of their
qualifications/experience and reprints of published work to be attached) are invited from qualified candidates for...
github.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...
Ref: 13/102900
Available immediately until 30th November 2015, to work on the development of bioinformatics approaches to aid analysis of data derived from the metabolomic profiling of biological matrices. The successful applicant will lead...
csb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...
NATIONAL JALMA INSTITUTE OF LEPROSY AND OTHER MYCOBACTERIAL DISEASES
(INDIAN COUNCIL OF MEDICAL RESEARCH)
P.O BOX 101,
Dr. M. Miyazaki Marg,
Tajganj, Agra - 282001
Applications are invited for a walk-in interview to be held in the Seminar...
github.com - Key features
Filters SNVs from any variant caller to remove false positives
Calculates metrics based on BAM files and provides filtering not possible with other tools
Fully user-configurable filtering (including which filters to use and their...
Gagneur lab at Gene Center, Ludwig-Maximilians-Universitaet, Munich, Germany
Deadline for applications : January 15, 2014.
Description :
We seek a talented and motivated post-doc to develop computational methods for inferring the molecular...
Only bioinformatician can understand that multiplication and division are different but same thing :)
Disclaimer: This cartoon is solely designed to create humour and fun, not to offend any computer experts.
FYI, I've found it useful to use MUMmer to extract the specific changes that Racon makes, so I can evaluate them individually:
minimap -t 24 assembly.fasta long_reads.fastq.gz | racon -t 24 long_reads.fastq.gz - assembly.fasta...