Shruti Paniwala
A Bioinformatician
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Breaking chromosomes to study cancer !!!
By Jit 4405 days agoUsing RNA-Guided Endonuclease (RGEN) technology or CRISPR/Cas9 genome engineering technology, CNIO and CNIC researchers have shown that it is possible to obtain such chromosomal translocations.pWhatsHap: a parallel, high-performance version of WhatsHap
By Jit 2825 days agobitbucket.org - Given the potential relevance of efficient haplotyping in several analysis pipelines, we have designed and engineered pWhatsHap, a parallel, high-performance version of WhatsHap. pWhatsHap is embedded in a toolkit developed in...RA at IISER Kolkata Computational Biology/Bioinformatics
Applications are invited from suitable candidates for research associate (post-doc; Rs. 22000-32000)/research fellow (16000-18000)/project assistant (Rs. 10000-14000) positions in the Department of Biological Sciences, Indian Institute for Science...Genome Annotation using MAKER tutorial !
By Shruti Paniwala 2788 days agowww.biostars.org - MAKER is a great tool for annotating a reference genome using empirical and ab initiogene predictions. GMOD, the umbrella organization that includes MAKER, has some nice tutorials online for running MAKER. However, these were quite...The Genome 10K Project
By Jit 4394 days agohttps://genome10k.soe.ucsc.edu The Genome 10K project aims to assemble a genomic zoo—a collection of DNA sequences representing the genomes of 10,000 vertebrate species, approximately one for every vertebrate genus. The trajectory of cost reduction...Genome assembly forensics: finding the elusive mis-assembly
By Jit 2751 days agoamos.sourceforge.net - We present the first collection of tools aimed at automated genome assembly validation. This work formalizes several mechanisms for detecting mis-assemblies, and describes their implementation in our automated validation pipeline,...Studentship and Traineeship in Bioinformatics at Barkatullah University, Bhopal
Department of Biotechnology & Bioinformatics Center Barkatullah University, Bhopal – 462 026 Studentship and Traineeship in Bioinformatics Applications are invited on plain paper from suitable candidates for Studentship and Traineeship...gVolante: Completeness Assessment of Genome/Transcriptome Sequences
By Jit 2559 days agogvolante.riken.jp - gVolante provides an online interface for completeness assessment of user’s original or publicly available sequence datasets as well as for browsing results of completeness assessment performed on publicly available genome and...Genome Informatics Section Lab !
Our section develops and applies computational methods for the analysis of massive genomics datasets, focusing on the challenges of genome sequencing and comparative genomics. We aim to improve such foundational processes and translate emerging...Guest Faculty at Pondicherry University
Pondicherry University, India Walk in interview for guest faculty in Pondicherry University, India. For more information please visit http://www.bicpu.edu.in/bioinfor140814.pdf
