Poonam Mahapatra
Bioinformatics Researcher
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ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
By Neel 2245 days agogithub.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...Research Associate NBFGR - Lucknow, Uttar Pradesh
NBFGR, Lucknow is recruiting Bioinformatics experts for the post of Research Associate Name of Position : Research Associate No of Post : One Desired candidate Profile : Candidate should be PhD in Bioinformatics or equivalent or Post-Graduation...LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
By BioStar 2212 days agocsb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...RA Bioinformatics at IISER
Advertisement: Research Position in Computational Biology in the group of Shree P. Pandey Positions available in the area of NGS data analysis, bioinformatics, plant genomics Project Description: Projects involves high throughput analysis of data...FiNGS: Filters for Next Generation Sequencing
By Neel 1838 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...RA Bioinformatics at North Eastern Hill University
Bioinformatics Infrastructure Facility, Department of RDAP, NEHU vacancy of Research Associate Name of the Post: Research Associate No. of the Post: 01 One Age Limit: Max. 35 years Salary: Rs. 22000/- per month plus HRA Required Job...Pacman
By Rahul Nayak 4040 days agoThe pacman package is an R package management tool that combines the functionality of base library related functions into intuitively named functions.Qualimap2: Evaluating next generation sequencing alignment data
By Jit 2737 days agoqualimap.bioinfo.cipf.es - Qualimap 2 is a platform-independent application written in Java and R that provides both a Graphical User Inteface (GUI) and a command-line interface to facilitate the quality control of alignment sequencing data and its derivatives like...RA WALK-IN-INTERVIEW @ NBFGR, Lucknow
F.No. 1(122)/2015-Admn. (CABin Project) Research Associate/Young Professional/SRF Zoology job vacancies in National Bureau of Fish Genetic Resources (NBFGR) Post Name: Research Associate (Computer Science/ Applications)...Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By BioJoker 2534 days agogithub.com - Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...
