Abhimanyu Singh
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G-compass: a comparative genome browser
By Jit 2985 days agowww.h-invitational.jp - G-compass (http://www.h-invitational.jp/g-compass/) is a comparative genome browser. It visualizes evolutionarily conserved genomic regions between human and other 12 vertebrates based on original genome alignments pursuing higher coverage (1,2)....Junior Bioinformatic position
Junior Bioinformatic position in the laboratory of Inflammation and immunology in cardiovascular pathologies at Humanitas: We are seeking a highly motivated young PhD student with strong interest in high throughput data analysis. Detailed...Circlator: automated circularization of genome assemblies using long sequencing reads
By Poonam Mahapatra 2952 days agosanger-pathogens.github.io - A tool to circularize genome assemblies. The algorithm and benchmarks are described in the Genome Biology manuscript. Citation: "Circlator: automated circularization of genome assemblies using long sequencing reads", Hunt et al, Genome Biology...Project Fellow @ National Institute of Malaria Research
National Institute of Malaria Research Sector 8, Dwarka, Delhi -110077 WALK IN INTERVIEW One position of project fellow is to be filled up in a DRL- funded research project on Molecular and morphological characterization of An. fluviatilis...assemblytics: delta file to analyze alignments of an assembly to another assembly or a reference...
By Jit 2922 days agohttp://assemblytics.com/ - Download and install MUMmer Align your assembly to a reference genome using nucmer (from MUMmer package) $ nucmer -maxmatch -l 100 -c 500 REFERENCE.fa ASSEMBLY.fa -prefix OUT Consult the MUMmer manual if you encounter problems Optional: Gzip...The Graveley Lab
Research in the Graveley lab is primarily focused on the regulation of alternative splicing and small RNA mediated gene regulation. These are fascinating and extraordinarily important mechanisms by which genes can be regulated. Our long-term goals...
LINKS scaffolder bloomfilter setting !
Last updated 2921 days ago by Jit➜ bin git:(master) ✗ ls -l total 68 drwxrwxr-x 3 urbe urbe 4096 Jun 15 12:15 lib -rwxrwxrwx 1 urbe urbe 65141 Jun 15 17:13 LINKS ➜ bin git:(master) ✗ pwd /home/urbe/Tools/LINKS_1.8.6/bin ➜ bloomfilter git:(master) ✗ swig -Wall -c++...Ph.D. student in Computational Systems Biology
Ph.D. student in Computational Systems Biology Location : The Luxembourg Centre for Systems Biomedicine (LCSB) at the University of Luxembourg, Luxembourg, Luxembourg Deadline for applications : unknown. Description : The Luxembourg Centre...Converting a VCF into a FASTA given some reference !
By Jit 2886 days agoconverting a VCF file into a FASTA file given a reference sequenceResearch Fellow @ Mendel laboratory
IRCCS Casa Sollievo della Sofferenza – Mendel laboratory is seeking one talented bioinformatician (Rome) Start date: immediate Duration: 1 year Funding Source: Institutional Salary on grant: B2 (€ 22.000/year gross) Contact Person...
