Jit
Enthusiast computational biologist with business dream !!!
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nQuire: A statistical framework for ploidy estimation using NGS short-read data
By Jit 2806 days agogithub.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...ClinCNV: Detection of copy number changes in Germline/Trio/Somatic contexts in NGS data
By Neel 2455 days agogithub.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...RA Bioinformatics at University of Delhi
BIOINFORMATICS INFRASTRUCTURE FACILITY GARGI COLLEGE (University of Delhi) SiriFort Road, New Delhi-110049 Walk- in- interview Bioinformatics Infrastructure Facility (BIF), Gargi College, University of Delhi invites to appear for interview...LoFreq*: A sequence-quality aware, ultra-sensitive variant caller for NGS data
By BioStar 2423 days agocsb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...National Research Centre on Plant Biotechnology for RA/JRF positions
National Research Centre on Plant Biotechnology - New Delhi, Delhi National Research Centre on Plant Biotechnology recruitments job vacancies for RA/JRF positions Name of post: Research Associate Salary: Rs.36000/-+ 30% HRA* Educational...FiNGS: Filters for Next Generation Sequencing
By Neel 2048 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...
Libraries or management tools for high throughput sequencing data
Last updated 733 days ago by LEGEGATB Library. The Genome Analysis Toolbox with de-Bruijn graph. A large part of tools developed by the GenScale team are based on this library.These methods enable the analysis of data sets of any size on multi-core desktop...Bioinformatics Faculty at UNIVERSITY OF HYDERABAD
UNIVERSITY OF HYDERABAD (A Central University established by an Act of Parliament) Prof. C.R.Rao Road, P.O. Central University Campus, Gachibowli, Hyderabad - 500 046 Advt.No. UH/HR/Rectt-2015/02 dt. 12.10.2015 The University invites...1mb long DNA with Nanopore technology
By Jit 3213 days agoLongest read of 1mb achievements with NanoporeSRF/JRF Biotechnology NRCPB - Delhi, Delhi
SRF/JRF job position in National Research Centre on Plant Biotechnology (NRCPB) JRF /1 Qualification : Master’s Degree in Biotechnology / life sciences with four years Bachelor’s Degree (or) Master’s Degree in Biotechnology / life sciences...
