BOL

github.com - SKESA is a DeBruijn graph-based de-novo assembler designed for assembling reads of microbial genomes sequenced using Illumina. Comparison with SPAdes and MegaHit shows that SKESA produces assemblies that have high sequence quality and contiguity,...

Institution/Company: University of Calgary Location: Calgary, AB Job Description: Novel diagnostic platform for detection of Osteoarthritis I invite applications from highly motivated individuals to join my laboratory as a PhD student...

genoplotr.r-forge.r-project.org - genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. Features Linear...

Job Description: three postdoc positions in computational biology are available at the Center for Genomic Science in Milan (Italy): - Development of computational methods to investigate the interplay between epigenetic and genetic layers and...

amos.sourceforge.net - Genome sequencing remains an inexact science, and genome sequences can contain significant errors if they are not carefully examined. Hawkeye is our new visual analytics tool for genome assemblies, designed to aid in identifying and correcting...

The main objectives of this Practical Course are to strengthen skills of PhD students and young researchers in the domain of Bioinformatics and Genome Data Analyses on the use of advanced fundamental algorithms and their applications in genome...

github.com - LTR_retriever is a command line program (in Perl) for accurate identification of LTR retrotransposons (LTR-RTs) from outputs of LTRharvest, LTR_FINDER, and/or MGEScan-LTR and generating non-redundant LTR-RT library for genome annotations. By...

Mitochondrial Genome of a 400,000-Year-Old Hominin from Spain Decoded

bioinfo.konkuk.ac.kr - The GMASS score is a novel measure for representing structural similarity between two assemblies. It will contribute to the understanding of assembly output and developing de novo...

Open source software is software that can be freely used, changed, and shared (in modified or unmodified form) by anyone. Open source software is made by many people, and distributed under licenses that comply with the Open Source Definition.The...