Jit
Enthusiast computational biologist with business dream !!!
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GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies.
By Abhimanyu Singh 3424 days agogithub.com - GRASS (GeneRic ASsembly Scaffolder)-a novel algorithm for scaffolding second-generation sequencing assemblies capable of using diverse information sources. GRASS offers a mixed-integer programming formulation of the contig scaffolding problem, which...20th International BioInformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME)
20th International BioInformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME) 9 - 14 August 2015 St. Augustine, Trinidad and Tobago Organiser: Christine Carrington (University of the West Indies - UWI, St. Augustine, Trinidad...MIX: Combining multiple assemblies from NGS data
By Rahul Nayak 3074 days agogithub.com - Mix is a tool that combines two or more draft assemblies, without relying on a reference genome and has the goal to reduce contig fragmentation and thus speed-up genome finishing. The proposed algorithm builds an extension graph where vertices...WuXi has acquired NextCODE Health
By Pranjali Yadav 4278 days agoShanghai, China-headquartered pharmatech company WuXi (NYSE: WX) has acquired NextCODE Health, a genomic analysis and bioinformatics company based in the USA.HALC: High throughput algorithm for long read error correction
By Jit 3042 days ago Comments (1)github.com - HALC, a high throughput algorithm for long read error correction. HALC aligns the long reads to short read contigs from the same species with a relatively low identity requirement so that a long read region can be aligned to at least one contig...RA Bioinformatics at CIBA
Recruitment The following posts are to be filled purely on temporary basis under CIBA Component of “Centre for Agricultural Bioinformatics (CABin)” project at this Institute. Posts Research Associate Date & Time of Interview 18th Feb 2015...nanofilt: Filtering and trimming of long read sequencing data
By Jit 2990 days ago Comments (1)github.com - Filtering on quality and/or read length, and optional trimming after passing filters.Reads from stdin, writes to stdout. Intended to be used: directly after fastq extraction prior to mapping in a stream between extraction and...Postdoctoral Researcher at Department of Biotechnology, Catholic University of Daegu, Kyungsan,...
Applications are invited from Indian nationals for a Post Doctoral position at Molecular Medical Laboratory, Department of Biotechnology, Catholic University of Daegu, Kyungsan, Kyungbuk, South Korea. Qualification required: PhD in Life Sciences/...BASE: a practical de novo assembler for large genomes using long NGS reads
By Rahul Nayak 2910 days agogithub.com - new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high probability to appear uniquely in the genome. Such seeds form the basis for BASE...Research Associate NBFGR - Lucknow, Uttar Pradesh
NBFGR, Lucknow is recruiting Bioinformatics experts for the post of Research Associate Name of Position : Research Associate No of Post : One Desired candidate Profile : Candidate should be PhD in Bioinformatics or equivalent or Post-Graduation...
