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github.com - This code is used to scaffold your assemblies using Hi-C data. This version implements some improvements in the original SALSA algorithm. If you want to use the old version, it can be found in the old_salsa branch. To use the latest version,...

No. ACTREC/Advt./ 7 /2015 Title of the Project Research Associate (One position) DBTs Biotechnology/Bioinformatics training centre PI Dr. Ashok Varma Duration of the Project Six Months from the date of appointment, can be extended...

Be proficient in LINUX, know perl or python, understand biology and Next Generation Sequencing. The intern will port Agile Assay Design pipelines into Galaxy. The intern will also learn to develope his/her own bioinformatics pipelines for PCR or...

JRF Bioinformatics Jobs recruitment in Indian Institute of Spices Research on temporary basis Name of the Scheme : Distributed Information Sub Centre – DISC Qualifications : M.Sc/ B Tech in Bioinformatics with NET/GATE or M Tech in...

Part of the reason R has become so popular is the vast array of packages available at the cran and bioconductor repositories. In the last few years, the number of packages has grown exponentially! This is a short post giving steps on how to...

sanger-pathogens.github.io - Roary is a high speed stand alone pan genome pipeline, which takes annotated assemblies in GFF3 format (produced by Prokka (Seemann, 2014)) and calculates the pan genome. Using a standard desktop PC, it can analyse datasets with thousands of...

Research Associate Bioinformatics job position in Indian Agricultural Statistics Research Institute (IASRI) Qualification : Ph.D. in Bioinformatics/ Agricultural Statistics/ Statistics/ Computer Science/ Computer Application/ Life Science/...

github.com - Alonge M, Soyk S, Ramakrishnan S, Wang X, Goodwin S, Sedlazeck FJ, Lippman ZB, Schatz MC: Fast and accurate reference-guided scaffolding of draft genomes. bioRxiv 2019. RaGOO is a tool for coalescing genome assembly contigs into...

The real bioinformatics scope lies if there are research labs which work in this field. One has to take account of that. If so then try to get information of those labs and visit them to get a hang of the work they pursue. For detail...

github.com - MGSE can harness the power of files generated in genome sequencing projects to predict the genome size. Required are the FASTA file containing a high continuity assembly and a BAM file with all available reads mapped to this assembly. The script...