My main topics of interest are:
The impact of non tree-like evolution such as horizontal gene transfers and hybridization on species biology
Evolution and adaptation of animals in the absence of sexual reproduction and the underlying...
liulab-dfci.github.io - This is the course material for STAT115/215 BIO/BST282 at Harvard University.
Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue
Ming TangYang LiuJack KangScarlett GeJiazhen RongPhillip NicolMaartin De Vries
We...
Institut Pasteur de Tunis (IPT):The IPT is a research institution founded in 1883. IPT is under the supervision of the Ministry of Health and is part of the Université El Manar of Tunis (Ministry of high Education). The missions...
bioinf.spbau.ru - Ultimate tool for resolving repeats in genome assemblies.
Though the specific implementation of the idea of the rectangle graph approach is already included into the current SPAdes distribution, we're also releasing the Rectangle Graph Module...
Lab are included within the Genomics, Bioinformatics and Evolution group of the UAB, and collaborate closely with other researchers in the Barcelona area, such as Xavier Estivill of the Centre for Genomic Regulation (CRG), Juan R González of the...
github.com - MARVEL consists of a set of tools that facilitate the overlapping, patching, correction and assembly of noisy (not so noisy ones as well) long reads.
The assembly process can be summarized as follows:
overlap
patch reads
overlap...
astrobiomike.github.io - This site aims to be a useful resource for bioinformatics beginners. Feel free to jump right in with the section most relevant to you, and if you're not sure, then the place to start is definitely Unix
For scientists in the MBL’s Gribble Lab, the rotifer (Brachionus manjavacas) is used as a model organism to study evolution, stress responses, the biology of aging, and maternal effects. Rotifers are small, easy to grow in the lab, have a short...