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Alignment of closely related whole genomes/scaffolds
By Rahul Nayak 3878 days ago Comments (1)www.cs.utoronto.ca - With the relative ease and low cost of current generation sequencing technologies has led to a dramatic increase in the number of sequenced genomes for species across the tree of life. This increasing volume of data requires tools that can quickly...4273π: Bioinformatics education on low cost ARM hardware
By Jitendra Narayan 4757 days ago4273π, an operating system image for Raspberry Pi based on Raspbian LinuxFinishing !!
By Jit 3401 days agowww.cbcb.umd.edu - The process of finishing a genome and moving it from a draft stage (the result of sequencing and initial assembly) to a complete genome is typically a time and resource intensive task. The advent of new sequencing technologies...Huber Lab
The Huber group develops computational and statistical methods to design and analyse novel experimental approaches in genetics and cell biology. Future projects and goals Large-scale systematic maps of gene-gene and gene-environment...PLAST: A fast, accurate and NGS scalable bank-to-bank sequence similarity search tool
By Jit 3206 days agohttps://plast.inria.fr/ - PLAST is a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the Blast suite of algorithms. Relying on unique software architecture,...Asst. PROF IN BIOINFORMATICS at JAIPUR NATIONAL UNIVERSITY
JAIPUR NATIONAL UNIVERSITY, SCHOOL OF LIFE SCIENCES (SIILAS CAMPUS) URGENTLY REQUIRES Asst. PROF IN BIOINFORMATICS. QUALIFICATION: AS PER UGC DESIRABLE: 1 YEAR EXPERIENCE IN ACADEMICS CONTACT immediately Prof...pbalign: maps PacBio reads to reference sequences and saves alignments to a BAM file
By Jit 3032 days agogithub.com - pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file...Research Associate@ School of Computational and Integrative Sciences under Jawaharlal Nehru...
School of Computational and Integrative Sciences under Jawaharlal Nehru University, New Delhi invited applications for filling up 4 posts of Research Associates (RA) and Junior Research Fellow (JRF) (2 posts each) purely on temporary basis, liable...
Convert EnsEMBL GTF to Annotation table (Geneid, GeneSymbol, GeneWiseChrLocation, GeneClass,...
Last updated 2965 days ago by Jitendra NarayanBash Script source: https://gist.github.com/santhilalsubhash/367befcf5216be4b1fd9 Information: This script converts EnsEMBL GTF...Human Genome Meeting 2014, Geneva, Switzerland
The spectacular advances of the last few years resulted in the rapid analysis of the genome sequence of each individual. The biomedical world is now faced with the enormous challenges of assigning pathogenicity to each genomic variant, the...
