Bulbul
Bioinformatician
Our Sponsors
Related items
QUAST-LG: Versatile genome assembly evaluation
By Jit 2226 days agocab.spbu.ru - QUAST-LG-a tool that compares large genomic de novo assemblies against reference sequences and computes relevant quality metrics. Since genomes generally cannot be reconstructed completely due to complex repeat patterns and low coverage regions, we...Workshop On Molecular Modeling and Dynamics Simulation Analyses
Workshop On Molecular Modeling and Dynamics Simulation Analyses August1-2, 2014 Organised By Centre of Excellence in Bioinformatics Bioinformatics Infrastructure Facility Department of Biochemistry University of...pyGenomeTracks: Standalone program and library to plot beautiful genome browser tracks
By Neel 2211 days agogithub.com - pyGenomeTracks aims to produce high-quality genome browser tracks that are highly customizable. Currently, it is possible to plot: bigwig bed (many options) bedgraph links (represented as arcs) Hi-C matrices (if HiCExplorer is...NovoGraph: building whole genome graphs from long-read-based de novo assemblies
By Jit 2205 days agogithub.com - NovoGraph: building whole genome graphs from long-read-based de novo assemblies An algorithmically novel approach to construct a genome graph representation of long-read-based de novo sequence assemblies. We then provide a proof of...Purge Haplotigs: Pipeline to help with curating heterozygous diploid genome assemblies
By Rahul Nayak 2173 days agobitbucket.org - Some parts of a genome may have a very high degree of heterozygosity. This causes contigs for both haplotypes of that part of the genome to be assembled as separate primary contigs, rather than as a contig and an associated haplotig. This can be an...RA at IISER Kolkata Computational Biology/Bioinformatics
Applications are invited from suitable candidates for research associate (post-doc; Rs. 22000-32000)/research fellow (16000-18000)/project assistant (Rs. 10000-14000) positions in the Department of Biological Sciences, Indian Institute for Science...GenomeView: genome browser and annotation editor
By Rahul Nayak 2157 days agosourceforge.net - GenomeView is a genome browser and annotation editor that displays reference sequence, annotation, multiple alignments, short read alignments and graphs. Most major data formats are supported. Local and internet files can be loaded.This project has...You and your friend have similar DNA !!!
By Jit 3777 days agoYour friends may be as genetically similar to you as your fourth cousin ...List of tools frequently used while genome assembly
By BioStar 2137 days agoTo decide which strategy should be our “preferred” genome assembly approach based on data rather than my gut-feeling about the “best assembly” I decided to do some testing with a known “true” reference E Coli K12 MG1655Protein function annotation and machine learning - UPMC - Paris, France
Protein function annotation and machine learning - UPMC - Paris, France Job Description: We are interested in finding an excellent postdoc with interests in protein functional annotation, machine learning and computer grids. The position is open...
