github.com - What is PhyloHerb: PhyloHerb is a wrapper program to process genome skimming data collected from plant materials. The outcomes include the plastid genome (plastome) assemblies, mitochondrial genome assemblies, nuclear ribosomal DNAs...
kallisto
Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rapid determination of read compatibility with targets)
Software (C++)
https://pachterlab.github.io/kallisto/
Sailfish
Estimation of isoform abundances...
www.cellbiol.com - This web development course, targeted at Biology and Bioinformatics students, aims at teaching from scratch all the skills needed to setup a fully working Linux web server and to develop and deploy web applications for Bioinformatics.
No previous...
Study the process of Adaptive Evolution, during which species adopt novel traits to overcome challenges. We retrace the evolutionary histories of genomic elements to determine the changes underlying adaptation and to discover previously unknown...
mesquiteproject.org - Mesquite is modular, extendible software for evolutionary biology, designed to help biologists organize and analyze comparative data about organisms. Its emphasis is on phylogenetic analysis, but some of its modules concern population genetics,...
We are recruiting for an exceptional individual to join us as a computational scientist, bioinformatician, or (research) software engineer with an interest in interactive data analysis platforms for biology and medicine within our Jalview...
The Department of Agronomy at National Taiwan University, Taipei, Taiwan,
invites applications for two full-time faculty positions beginning August
1, 2021 at the rank of Assistant Professor, Associate Professor or
Professor in Biometry and...
github.com - Dahak is a software suite that integrates state-of-the-art open source tools for metagenomic analyses. Tools in the dahak software suite will perform various steps in metagenomic analysis workflows including data pre-processing, metagenome assembly,...
liulab-dfci.github.io - This is the course material for STAT115/215 BIO/BST282 at Harvard University.
Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue
Ming TangYang LiuJack KangScarlett GeJiazhen RongPhillip NicolMaartin De Vries
We...