Jit
Enthusiast computational biologist with business dream !!!
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You and your friend have similar DNA !!!
By Jit 4338 days agoYour friends may be as genetically similar to you as your fourth cousin ...Clustergrammer is a web-based tool for visualizing high-dimensional data as an interactive and...
By BioStar 2119 days agogithub.com - Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end...Protein function annotation and machine learning - UPMC - Paris, France
Protein function annotation and machine learning - UPMC - Paris, France Job Description: We are interested in finding an excellent postdoc with interests in protein functional annotation, machine learning and computer grids. The position is open...LoReTTA, a user-friendly tool for assembling viral genomes from PacBio sequence data
By Neel 1816 days ago Comments (1)academic.oup.com - LoReTTA (Long Read Template-Targeted Assembler), a tool designed for performing de novo assembly of long reads generated from viral genomes on the PacBio platform. LoReTTA exploits a reference genome to guide the assembly process, an approach that...Swabs to Genomes: A Comprehensive Workflow
By Rahul Nayak 4325 days agopeerj.com - The sequencing, assembly, and basic analysis of microbial genomes, once a painstaking and expensive undertaking, has become almost trivial for research labs with access to standard molecular biology and computational tools. However, there are a wide...GenomeQC: a quality assessment tool for genome assemblies and gene structure annotations
By Neel 1486 days agogithub.com - The GenomeQC web application is implemented in R/Shiny version 1.5.9 and Python 3.6 and is freely available at https://genomeqc.maizegdb.org/ under the GPL license. All source code and a containerized version of the GenomeQC pipeline is...Assistant Professor in Bioinformatics at Indian Institute of Technology Delhi
Indian Institute of Technology Delhi Hauz Khas ,New Delhi – 110016 ROLLING ADVERTISEMENT NO. 01/2014(E-1) ADVERTISEMENT FOR THE POSITIONS OF ASSISTANT PROFESSOR CANDIDATES CAN APPLY ANY TIME DURING THE YEAR. IIT Delhi invites applications...Minda: a tool for evaluating structural variant (SV) callers
By LEGE 804 days agogithub.com - Minda is a tool for evaluating structural variant (SV) callers that standardizes VCF records for compatibility with both germline and somatic SV callers, benchmarks against a single VCF input file, or benchmarks against an ensemble call set...Lecturer/Senior Lecturer (Level B/C) in Bioinformatics
Lecturer/Senior Lecturer (Level B/C) in Synthetic Biology, Research Fellow (Level B) in Synthetic Biology & Lecturer/Senior Lecturer (Level B/C) in Bioinformatics Apply now Job no: 494553 Work type: Continuing full time Vacancy type:...Jaeger : an accurate and fast deep-learning tool to detect bacteriophage sequences
By LEGE 286 days agogithub.com - Jaeger is a tool that utilizes homology-free machine learning to identify phage genome sequences that are hidden within metagenomes. It is capable of detecting both phages and prophages within metagenomic assemblies.
