github.com - The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT® Analysis suite. All packages are believed to be open source or freely available for non-commercial use. See the individual...
gehlenborglab.shinyapps.io - UpSetR generates static UpSet plots. The UpSet technique visualizes set intersections in a matrix layout and introduces aggregates based on groupings and queries. The matrix layout enables the effective representation of associated data, such...
The Department of Biostatistics and Bioinformatics at Duke University Medical Center is seeking a Postdoctoral Associate for a one year appointment to work on several high-dimensional research projects. The specific goals of the project are to...
www.rdatamining.com - This website presents examples, documents and resources on data mining with R. Documents on using R for data mining are available to download for non-commercial personal use, including R Reference card for Data Mining, R and Data Mining:...
Python Programming is a general purpose programming language that is open source, flexible, powerful and easy to use. One of the most important features of python is its rich set of utilities and libraries for data processing and analytics...
There are many R software and bioconductor packages for NGS data analysis, some of them are as follows
Biostrings
The Biostrings package from Bioconductor provides an advanced environment for efficient sequence management and analysis in R. It...
Using RNA-Guided Endonuclease (RGEN) technology or CRISPR/Cas9 genome engineering technology, CNIO and CNIC researchers have shown that it is possible to obtain such chromosomal translocations.
http://www.rstudio.com/ - RStudio IDE is a powerful and productive user interface for R. It’s free and open source, and works great on Windows, Mac, and Linux.
The developers and expert trainers are the authors of several popular R packages, including ggplot2, plyr,...
milkweedgenome.org - Some of the useful bioinformatics scripts.
For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly.
http://milkweedgenome.org/?q=scripts