Jit
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Synima: a Synteny imaging tool for annotated genome assemblies
By Abhimanyu Singh 2387 days agogithub.com - Synima written in Perl, which uses the graphical features of R. Synima takes orthologues computed from reciprocal best BLAST hits or OrthoMCL, and DAGchainer, and outputs an overview of genome-wide synteny in PDF. Each of these programs are included...Network Analysis @ Indian Statistical Institute
Indian Statistical Institute Kolkata invites applications for the following posts 2013 Oct Advertisement from Indian Statistical Institute Post: Network Analysis No. of Positions: 01 Educational Qualifications: Candidate should have...ANItools web: a web tool for fast genome comparison within multiple bacterial strains
By Jit 2372 days agohttp://ani.mypathogen.cn/ - ANItools is a software package written by PERL scripts that can be run in a Linux/Unix system. If you want to compare bacterial genomes and calculate their average nucleotide identity (ANI), you could download and run this program directly. Or you...Troyanskaya Lab
In our research, we combine computational methods with an experimental component in a unified effort to develop comprehensive descriptions of genetic systems of cellular controls, including those whose malfunctioning becomes the basis of genetic...Purge Haplotigs: Pipeline to help with curating heterozygous diploid genome assemblies
By Rahul Nayak 2339 days agobitbucket.org - Some parts of a genome may have a very high degree of heterozygosity. This causes contigs for both haplotypes of that part of the genome to be assembled as separate primary contigs, rather than as a contig and an associated haplotig. This can be an...Assistant Professor in Molecular Synthesis for Drug Discovery and Development @ CBMR, Lucknow
ADVERTISEMENT FOR FACULTY POSITIONS AT CENTRE OF BIOMEDICAL RESEARCH (CBMR), LUCKNOW Details of the Positions and Pay Structure: 03 Posts for Assistant Professor in Molecular Synthesis for Drug Discovery and Development Essential...LTR_Finder: an efficient program for finding full-length LTR retrotranspsons in genome sequences.
By Neel 2312 days agogithub.com - LTR_Finder is an efficient program for finding full-length LTR retrotranspsons in genome sequences. The Program first constructs all exact match pairs by a suffix-array based algorithm and extends them to long highly similar pairs. Then...Junior Bioinformatic position
Junior Bioinformatic position in the laboratory of Inflammation and immunology in cardiovascular pathologies at Humanitas: We are seeking a highly motivated young PhD student with strong interest in high throughput data analysis. Detailed...Apollo: First instantaneous, collaborative genomic annotation editor available on the Web
By Jit 2174 days agogenomearchitect.github.io - Apollo is a plug-in for the JBrowse Genome Viewer. In addition to genes and pseudogenes, users can annotate ncRNAs (snRNA, snoRNA, tRNA, rRNA), miRNAs, repeat regions, and transposable elements; each annotation type has its own...Project Fellow @ National Institute of Malaria Research
National Institute of Malaria Research Sector 8, Dwarka, Delhi -110077 WALK IN INTERVIEW One position of project fellow is to be filled up in a DRL- funded research project on Molecular and morphological characterization of An. fluviatilis...
