The Brent Lab is developing and applying computational methods for mapping gene regulation networks, modeling them quantitatively, and engineering new behaviors into them.
To remove all line ends (\n) from a Unix text file:
sed ':a;N;$!ba;s/\n//g' filename.txt > newfilename_oneline.txt
To get average for a column of numbers (here the second column $2):
awk '{ sum += $2; n++ } END { if (n > 0) print sum / n;...
The interaction between proteins and other molecules is fundamental to all biological functions. In this section we include tools that can assist in prediction of interaction sites on protein surface and tools for predicting the structure of the...
The purpose of this book is to give an introduction into statistics in order to solve some problems of bioinformatics. Statistics provides procedures to explore and visualize data as well as to test biological hypotheses. The book intends to be...
Computer Aided Protein Structure Prediction; Identification of Vaccine
Candidates (T-Epitope prediction); Analysis of Nucleotide/Protein Sequences; Development of Web Server/
Software; Creation of Public Domain Resources in Biology
Present...
github.com - The BETSY provides a command-line interface and available at https://github.com/jefftc/changlab. A user first searches in the knowledge base for desired output and then BETSY develops an initial workflow to produce that data which is later...