github.com - DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation...
Distributed Information Centre
Department of Agricultural Biotechnology
Assam Agricultural University
Jorhat – 785 013
Walk-in interview
(ABT/DIC/01/2014 (No. AAU/ABT/DIT/Advt. 01/2015/111 Dtd. 19-05-2015)
Walk in interview for the...
github.com - Sunbeam is a pipeline written in snakemake that simplifies and automates many of the steps in metagenomic sequencing analysis. It uses conda to manage dependencies, so it doesn't have pre-existing dependencies or admin...
Dept of Biochemistry
North-Eastern Hill University
(A University with Potential for Excellence)
Umshing, Shillong- 793 022
Applications are invited for the post of Senior Research Fellow- SRF (1) and Junior Research Fellow- JRF (1) to be...
github.com - Liftoff is a tool that accurately maps annotations in GFF or GTF between assemblies of the same, or closely-related species. Unlike current coordinate lift-over tools which require a pre-generated “chain” file as input, Liftoff is a...
Question at http://rosalind.info/problems/1b/
#Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return: Pattern, the reverse complement of Pattern.use strict;use warnings;my $string="AAAACCCGGT";my $finalString="";my %hash...
github.com - judi comes from the idea of bringing the power and efficiency of doit to execute any kind of task under many combinations of parameter settings.
https://github.com/ncbi/JUDI
Jawaharlal Nehru
TROPICAL BOTANIC GARDEN AND RESEARCH INSTITUTE
An organization under the Kerala State Council for Science, Technology and Environment and
National Centre of Excellence, Government of India
Applications are invited for the...
github.com - iMAGine is a metagenomic workflow which includes filtering, assembling, and binning.
This workflow includes the following tools which are needed to be installed in the system.
fastp
spades assembler
QUAST
bwa
samtools
metabat2
CheckM
Indian Institute of Maize Research Jobs 2015 –
Sr Research Fellow & Technical Asst Posts: Indian Institute of Maize Research (IIMR), New Delhi has advertised a notification for the recruitment of Senior Research Fellow & Technical...