Jit
Enthusiast computational biologist with business dream !!!
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Ten International Scholarships for Indian Biotechnology and Bioinformatics Students
By Priya Singh 2790 days ago Comments (10)10 International Scholarships for Indian StudentsERGO 2.0 Bioinformatics suites
By Jit 2784 days agowww.igenbio.com - ERGO 2.0 provides a systems biology informatics toolkit centered on comparative genomics to capture, query, and visualize sequenced genomes. Using Igenbio's proprietary algorithms, and the most comprehensive genomic database integrated with...Flye: Fast and accurate de novo assembler for single molecule sequencing reads
By BioJoker 2098 days agogithub.com - Flye is a de novo assembler for single molecule sequencing reads, such as those produced by PacBio and Oxford Nanopore Technologies. It is designed for a wide range of datasets, from small bacterial projects to large mammalian-scale assemblies. The...RA Bioinformatics at NATIONAL INSTITUTE OF BIOMEDICAL GENOMICS, INDIA
NATIONAL INSTITUTE OF BIOMEDICAL GENOMICS (An Autonomous Institution of the Government of India) P.O.: N.S.S., Kalyani 741251, West Bengal Advertisement No. 137/ESTB/NIBMG/17-18 Position available Project Description: Several positions are...StringTie Transcript assembly and quantification for RNA-Seq
By Jit 1664 days agoccb.jhu.edu - StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts. It uses a novel network flow algorithm as well as an optional de novo assembly step to assemble and quantitate full-length...Bioinformatics lectures !
By Jit 2587 days agorob-p.github.io - Computational Biology is a huge field of study, that touches upon many distinct algorithmic and biological areas of study. What we are able to cover in this course will depend, in part, on the pace at which we move, which I will attempt to...MEC: Contig Misassembly Correction
By BioStar 1790 days agogithub.com - MEC, to identify and correct misassemblies in contigs. Firstly, MEC takes fragment coverage as the feature to detect the candidate misassemblies. Then, it can distinguish a large number of false positives from the candidate misassemblies based on...India and Germany to begin joint research in the area of 'Bioinformatics in Health Research'
By Rahul Nayak 2538 days agoTo facilitate bilateral cooperation in biotechnology between the scientific communities of India and Germany, the Department of Biotechnology (DBT) will soon begin collaborative research in the identified priority area of 'Bioinformatics in Health...SvABA: Structural variation and indel detection by local assembly
By Jit 1755 days agogithub.com - SvABA is a method for detecting structural variants in sequencing data using genome-wide local assembly. Under the hood, SvABA uses a custom implementation of SGA (String Graph Assembler) by Jared Simpson, and BWA-MEM by Heng Li....An Introduction to Applied Bioinformatics
By Jit 2494 days agohttp://readiab.org/ - IAB is primarily being developed by Greg Caporaso(GitHub/Twitter: @gregcaporaso) in the Caporaso Lab at Northern Arizona University. You can find information on the courses I teach on my teaching website and...
