Archana Malhotra
Computational Biologist
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npScarf: Scaffolding and Completing Assemblies in Real-time Fashion
By Jit 2789 days agogithub.com - npScarf (jsa.np.npscarf) is a program that scaffolds and completes draft genomes assemblies in real-time with Oxford Nanopore sequencing. The pipeline can run on a computing cluster as well as on a laptop computer for microbial datasets. It...RA Bioinformatics at NIPGR
Applications are invited from suitable candidates for filling up one position of Research Associate (RA) in the Institute with Dr. Senthil-Kumar Muthappa, Scientist, NIPGR, in the scheme of "Short-Term Research Fellowship" programme. The position is...JRF in Bioinformatics @ Tezpur Universityn
Tezpur University: Napaam – 784 028: Assam Applications are invited for Walk-in-Interview for the following temporary positions in the MHRD sponsored Centre of Excellence under FAST project entitled “Machine Learning Research and Big Data...SRF post in NEHU, Shillong
Dept of Biochemistry North-Eastern Hill University Umshing, Shillong- 793 022 Applications are invited for the post of Senior Research Fellow- SRF (one) and Junior Research Fellow- JRF (one) to be appointed in a SERB-funded major research...RA Bioinformatics at Alagappa University
RA Bioinformatics Eligibility : MSc(Bio-Chemistry, Bio-Informatics, Bio-Tech) Location : Chennai Last Date : 20 Aug 2015 Hiring Process : Walk - In Alagappa University - Job Details RA Bioinformatics Job position in Alagappa...shovill: Assemble bacterial isolate genomes from Illumina paired-end reads
By BioStar 1469 days agogithub.com - Shovill is a pipeline which uses SPAdes at its core, but alters the steps before and after the primary assembly step to get similar results in less time. Shovill also supports other assemblers like SKESA, Velvet and Megahit, so you can take...Bioinformatics Made Easy Search: Bioinformatics tools and run genomic analysis in the cloud
By Rahul Nayak 3431 days agohttps://insidedna.me/ - InsideDNA makes hundreds of bioinformatics tools immediately available to run via an easy-to-use web interface and allows an accurate search across all functions, tools and pipelines. With InsideDNA, you can upload and store your own...
Run miniasm assembler on nanopore reads !
Last updated 2580 days ago by Jit Comments (5)Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...JRF Position – International Institute of Information Technology, Hyderabad
International Institute of Information Technology, Hyderabad Center for Computational Natural Sciences and Bioinformatics Junior Research Fellowship Position Applications are invited for one JRF position in the following DAE sponsored...TAREAN: A computational tool for identification and characterization of satellite DNA from...
By Surabhi Chaudhary 2432 days agobitbucket.org - TAndem REpeat ANalyzer -TAREAN – is a computational pipeline for unsupervised identification of satellite repeats from unassembled sequence reads. The pipeline uses low-pass whole genome sequence reads and performs their...
