Jit
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Genomic Scientist at UDSC
Centre for Genetic Manipulation of Crop Plants Department of Genetics University of Delhi South Campus NEW DELHI – 110 021 WALK-IN-INTERVIEW FOR THE TEMPORARY POSITIONS OF RESEACH SCIENTIT & LAB / FIELD ATTENDANT 1 Research...LSC :a long read error correction tool
By Jit 2306 days agowww.healthcare.uiowa.edu - Getting Started These simple steps will help you integrate LSC into your transcriptomics analysis pipeline. Read the LSC_requirements for running LSC. Download and set-up the LSC package. Follow the tutorial to see how...Walk-ins for JRF ans SRF post in Assam Agricultural University
Distributed Information Centre Department of Agricultural Biotechnology Assam Agricultural University Jorhat – 785 013 Walk-in interview (ABT/DIC/01/2014 (No. AAU/ABT/DIT/Advt. 01/2015/111 Dtd. 19-05-2015) Walk in interview for the...FinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
By Jit 2289 days agogithub.com - Here is the command to run the tool: python finisherSC.py destinedFolder mummerPath If you are running on server computer and would like to use multiple threads, then the following commands can generate 20 threads to run FinisherSC. python...SRF post in NEHU, Shillong
Dept of Biochemistry North-Eastern Hill University (A University with Potential for Excellence) Umshing, Shillong- 793 022 Applications are invited for the post of Senior Research Fellow- SRF (1) and Junior Research Fellow- JRF (1) to be...rHAT: a seed-and-extension-based noisy long read alignment tool
By Abhimanyu Singh 2254 days agogithub.com - rHAT is a seed-and-extension-based noisy long read alignment tool. It is suitable for aligning 3rd generation sequencing reads which are in large read length with relatively high error rate, especially Pacbio's Single Molecule Read-time (SMRT)...
Reverse Complement Problem Solved with Perl
Last updated 3456 days ago by JitQuestion at http://rosalind.info/problems/1b/ #Find the reverse complement of a DNA string.#Given: A DNA string Pattern.#Return: Pattern, the reverse complement of Pattern.use strict;use warnings;my $string="AAAACCCGGT";my $finalString="";my %hash...ClipCrop: a tool for detecting structural variations with single-base resolution using...
By BioJoker 2135 days agogithub.com - ClipCrop for detecting SVs with single-base resolution using soft-clipping information. A soft-clipped sequence is an unmatched fragment in a partially mapped read. To assess the performance of ClipCrop with other SV-detecting tools, we generated...Appointment of two traineeships and two studentships in Bioinformatics
Jawaharlal Nehru TROPICAL BOTANIC GARDEN AND RESEARCH INSTITUTE An organization under the Kerala State Council for Science, Technology and Environment and National Centre of Excellence, Government of India Applications are invited for the...vt: a variant tool set that discovers short variants from Next Generation Sequencing data.
By Jit 1762 days agogenome.sph.umich.edu - vt is a variant tool set that discovers short variants from Next Generation Sequencing data. https://genome.sph.umich.edu/wiki/Vt https://github.com/atks/vt
