Jit
Enthusiast computational biologist with business dream !!!
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Project Assistant Position at JMI
Project Assistant Position (@ Rs.10,000/pm Fixed) is available for one year ina research project funded by the Department of Science and Technology entitled, "Folding and stability of naturally truncated photosynthetic pigment,C- phycoerythrin from...
Run miniasm assembler on nanopore reads !
Last updated 2534 days ago by Jit Comments (5)Miniasm is a very fast OLC-based de novo assembler for noisy long reads. It takes all-vs-all read self-mappings (typically by minimap) as input and outputs an assembly graph in the GFA format. Different from mainstream...JAMIA HAMDARD Bioinformatics Faculty Jobs 2014
JAMIA HAMDARD (Deemed University) Hamdard Nagar, New Delhi – 110 062 R E C R U I T M E N T (Advertisement No. 5/2014) Applications on prescribed form are invited for filling up the following teaching positions in the Department of...TAREAN: A computational tool for identification and characterization of satellite DNA from...
By Surabhi Chaudhary 2386 days agobitbucket.org - TAndem REpeat ANalyzer -TAREAN – is a computational pipeline for unsupervised identification of satellite repeats from unassembled sequence reads. The pipeline uses low-pass whole genome sequence reads and performs their...Joao Pedro de Magalhaes Lab
Ageing has a profound impact on human society and modern medicine, yet it remains a major puzzle of biology. The goal of my work is to help understand the genetic, cellular, and molecular mechanisms of ageing. In the long term, I would like my work...GenomeMapper: Simultaneous alignment of short reads against multiple genomes
By Jit 2375 days ago1001genomes.org - GenomeMapper is a short read mapping tool designed for accurate read alignments. It quickly aligns millions of reads either with ungapped or gapped alignments. It can be used to align against multiple genomes simulanteously or against a single...Postgraduate Research Associate Bioinformatics / Computational Biology (Reference code: 59)
The Department of Biotechnology, group “Genome Bioinformatics” is currently seeking a Postgraduate Research Associate Bioinformatics / Computational Biology (Reference code: 59) Extent of employment: 30 Hours per Week Duration of employment: 1st...JBrowse: Embeddable genome browser built completely with JavaScript and HTML5
By Jit 2340 days agogithub.com - JBrowse is a fast, embeddable genome browser built completely with JavaScript and HTML5, with optional run-once data formatting tools written in Perl. Headline Features: Fast, smooth scrolling and zooming. Explore your genome with unparalleled...Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads
By Rahul Nayak 2228 days agosourceforge.net - Rainbow is developed to provide an ultra-fast and memory-efficient solution to clustering and assembling short reads produced by RAD-seq. First, Rainbow clusters reads using a spaced seed method. Then, Rainbow implements a heterozygote calling like...
