Jit
Enthusiast computational biologist with business dream !!!
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Ribbon: Visualizing complex genome alignments and structural variation:
By Jit 3022 days agohttp://genomeribbon.com/ - Ribbon can be used for long reads, short reads, paired-end reads, and assembly/genome alignments. Instructions for each data format are available by clicking on "instructions" in each tab on the right. Local installation: You can install Ribbon...Protein function annotation and machine learning - UPMC - Paris, France
Protein function annotation and machine learning - UPMC - Paris, France Job Description: We are interested in finding an excellent postdoc with interests in protein functional annotation, machine learning and computer grids. The position is open...jobTree based python wrapper to run the genome simulation tool suite Evolver
By Jit 3013 days agogithub.com - evolverSimControl (eSC) can be used to simulate multi-chromosome genome evolution on an arbitrary phylogeny (Newick format). In addition to simply running evolver, eSC also automatically creates statistical summaries of the simulation...String graph based genome assembly software and tools !
By Rahul Nayak 3002 days agoIn graph theory, a string graph is an intersection graph of curves in the plane; each curve is called a "string". String graphs were first proposed by E. W. Myers in a 2005 publication.Assistant Professor in Bioinformatics at Indian Institute of Technology Delhi
Indian Institute of Technology Delhi Hauz Khas ,New Delhi – 110016 ROLLING ADVERTISEMENT NO. 01/2014(E-1) ADVERTISEMENT FOR THE POSITIONS OF ASSISTANT PROFESSOR CANDIDATES CAN APPLY ANY TIME DURING THE YEAR. IIT Delhi invites applications...AliTV—interactive visualization of whole genome comparisons
By Jit 2980 days agogithub.com - AliTV, which provides interactive visualization of whole genome alignments. AliTV reads multiple whole genome alignments or automatically generates alignments from the provided data. Optional feature annotations and phylo- genetic information are...Lecturer/Senior Lecturer (Level B/C) in Bioinformatics
Lecturer/Senior Lecturer (Level B/C) in Synthetic Biology, Research Fellow (Level B) in Synthetic Biology & Lecturer/Senior Lecturer (Level B/C) in Bioinformatics Apply now Job no: 494553 Work type: Continuing full time Vacancy type:...GenomeTools: The versatile open source genome analysis software
By Jit 2952 days agohttp://genometools.org/ - The GenomeTools genome analysis system is a free collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary named gt. It is based on a C library named...PhD opportunity at Université de Liège - Belgium
The Bioinformatics and Systems Biology Unit of Université de Liège (Belgium) is looking for a highly motivated master student with programming skills for a PhD thesis project (4 years, fully funded) with the goal of designing computational tools...AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references
By Manisha Mishra 2883 days agogithub.com - AlignGraph is a software that extends and joins contigs or scaffolds by reassembling them with help provided by a reference genome of a closely related organism. Using AlignGraph AlignGraph --read1 reads_1.fa --read2 reads_2.fa --contig contigs.fa...
