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Bioinformatics Textbook Track
Find more about Rosalind puzzle at...
github.com - new de novo assembler called BASE. It enhances the classic seed-extension approach by indexing the reads efficiently to generate adaptive seeds that have high probability to appear uniquely in the genome. Such seeds form the basis for BASE...
Applications are invited from Indian nationals for the post of Research Assistant (on contract) in research project entitled “Identification of novel drug targets in Aspergillus fumigatus genome prioritized by essentiality based screening and...
github.com - nQuire implements a set of commands to estimate ploidy level of individuals from species, where recent polyploidization occurred and intraspecific ploidy variation is observed. Specifically, nQuire uses next-generation sequencing data to distinguish...
Research Associate
International Centre for Genetic Engineering and Biotechnology (ICGEB)
Address: Aruna Asaf Ali Marg, Jawaharlal Nehru University, New Delhi
Postal Code: 110067
City: New Delhi
State: Delhi
Qualifications: Experience in many...
github.com - ClinCNV detects CNVs in germline and somatic context in NGS data (targeted and whole-genome). We work in cohorts, so it makes sense to try ClinCNV if you have more than 10 samples (recommended amount - 40 since we estimate variances from...
Research Associate Statistics
Eligibility : M Phil / Phd, MSc
Location : Delhi
Last Date : 27 Jun 2015
Hiring Process : Walk - In
Indian Agricultural Statistics Research Institute (IASRI) - Job DetailsDate of posting:03 Jun...
csb5.github.io - LoFreq* (i.e. LoFreq version 2) is a fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data. It makes full use of base-call qualities and other sources of errors inherent in sequencing (e.g. mapping or...
Research Associate Position at ICGEB, New Delhi with Dr. Amit Sharma
Starting 15th July 2015, the position relates to a project specifically for in silico drug docking, screening, design, optimisation and linkage with active chemists....
github.com - Key features
Filters SNVs from any variant caller to remove false positives
Calculates metrics based on BAM files and provides filtering not possible with other tools
Fully user-configurable filtering (including which filters to use and their...