Abhimanyu Singh
A bioinformatics beginner
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WiseScaffolder
By Poonam Mahapatra 3037 days agoabims.sb-roscoff.fr - Function WiseScaffolder is a stand-alone semi-automatic application for genome scaffolding of pre-assembled contigs using mate-pair data. It also produces editable scaffold maps, allowing either to build gapped scaffolds or usable as a common...HISAT2: a fast and sensitive alignment program for mapping next-generation sequencing reads
By Rahul Nayak 2373 days agogithub.com - HISAT2 is a fast and sensitive alignment program for mapping next-generation sequencing reads (both DNA and RNA) to a population of human genomes (as well as to a single reference genome). Based on an extension of BWT for...RA Bioinformatics at National Bureau of Fish Genetic Resources
F.No. 1(16)/2016-Admn. (DBT-BBSRC Project) Research Associate /JRF Biotechnology Job vacancies in National Bureau of Fish Genetic Resources on contract basis Research Associate /01 Post Essential: Ph.D. in Bioinformatics or 03 years research...Gblocks: eliminates poorly aligned positions and divergent regions of a DNA or protein alignment
By Poonam Mahapatra 2348 days agomolevol.cmima.csic.es - Gblocks eliminates poorly aligned positions and divergent regions of a DNA or protein alignment so that it becomes more suitable for phylogenetic analysis. This server implements the most important features of the Gblocks program to make its...DBT – Bioinformatics Industrial Training Programme (BIITP) 2016 – 17
By Jit 3023 days agoLast date for submitting the online application has been extended till 5th August 2016.Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
By Jit 2265 days agowww.ncbi.nlm.nih.gov - Mulan: Multiple-sequence local alignment and visualization for studying function and evolution Mulan (http://mulan.dcode.org/), a novel method and a network server for comparing multiple draft and finished-quality sequences to identify functional...Bioinformatics Technical Position at CDAC Pune - India
CDAC Pune Recruitment 2016 – Apply Online for Technical Positions: Department of Information Technology under the Ministry of Communications and Information Technology, Government of India, Centre for Development of Advanced Computing (C-DAC), Pune...MSAProbs - Parallel and accurate multiple sequence alignment
By Neel 1945 days agomsaprobs.sourceforge.net - MSAProbs is a well-established state-of-the-art multiple sequence alignment algorithm for protein sequences. The design of MSAProbs is based on a combination of pair hidden Markov models and partition functions to calculate posterior...Research Project at IIT, Madras
Two project positions are available to work on (i) molecular modeling and molecular dynamics simulations and (ii) development of bioinformatics databases and tools at Protein Bioinformatics Lab, Department of Biotechnology, IIT Madras. Duration :...VG: variation graph data structures, interchange formats, alignment, genotyping, and variant...
By Jit 1743 days agogithub.com - Variation graphs provide a succinct encoding of the sequences of many genomes. A variation graph (in particular as implemented in vg) is composed of: nodes, which are labeled by sequences and ids edges, which connect two nodes via either of...
