Jit
Enthusiast computational biologist with business dream !!!
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FiNGS: Filters for Next Generation Sequencing
By Neel 1343 days agogithub.com - Key features Filters SNVs from any variant caller to remove false positives Calculates metrics based on BAM files and provides filtering not possible with other tools Fully user-configurable filtering (including which filters to use and their...
Structure of Binary files used for storing sequencing data-bam and sff
Last updated 4100 days ago by Rahul AgarwalMany times bioinformatician needs to parse binary files like bam and sff. Advantage of binary files is that they occupy less space in memory with maximum information content. Link for those who looking for structure of Bam and sff...-
Bioinformatics and Sequencing Courses and Workshops
Last updated 4087 days ago by Rahul Agarwal Comments (2)Swiss Institute of Bioinformatics (SIB) organises lots of bioinformatics courses covering wide range of topics: http://www.isb-sib.ch/education/training-courses.html Canadian bioinformatics also organises various bioinformatics and sequencing... Illuminating next generation sequencing data with Go
By Rahul Agarwal 4088 days agotalks.biogo.googlecode.com - Another good lecture for Illumina sequencing data analysis from Dan Kortschak, Bioinformatics Group, School of Molecular and Biomedical Science ,The University of AdelaideRole of microbes in forensic science
By Rahul Agarwal 4051 days ago‘Microbial clock’ determine time of deathThe First 50 Plant Genomes
By Rahul Agarwal 4029 days agowww.crops.org - Plant scientists can exploit available 50 plant complete genomic data for their resequencing or other related projects for understanding the genetic mechanism behind their different traits and molecular evolution. Complete information about these...Bioinformatics job in Genotypic Tech, India
Genotypic Technology, the first Genomics Company of India is poised to become the next generation life sciences company. We are hiring professionals for our high end Genomics Labs (Molecular Biology/ Microarray/NGS) and Bioinformatics...International Conference on Bioinformatics Models, Methods and Algorithms
By Rahul Agarwal 3680 days agowww.bioinformatics.biostec.org - The purpose of the International Conference on Bioinformatics Models, Methods and Algorithms is to bring together researchers and practitioners interested in the application of computational systems and information technologies to the field of...AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
By BioStar 2506 days agosourceforge.net - AIRVF that works on flowgram, raw and mapped reads and called variants to reduce artifact-driven false variant calls. Tests on sequencing data of standard reference material showed up to ∼98% reduction of false variants when combined to...BlasR Mapping single molecule sequencing reads using Basic Local Alignment with Successive...
By Jit 2354 days agobix.ucsd.edu - BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion...
