Jit
Enthusiast computational biologist with business dream !!!
Our Sponsors
Related items
FQC Dashboard: Integrates FastQC results into a web-based, interactive, and extensible FASTQ...
By Shruti Paniwala 1943 days agogithub.com - FQC is software that facilitates quality control of FASTQ files by carrying out a QC protocol using FastQC, parsing results, and aggregating quality metrics into an interactive dashboard designed to richly summarize individual sequencing runs. The...d3Network:Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from R.
By Jit 2892 days agochristophergandrud.github.io - Mike Bostock’s D3.js is great for creating interactive network graphs with JavaScript. The d3Network package makes it easy to create these network graphs from R. The main idea is that you should able to take...LIBSVM -- A Library for Support Vector Machines
By Neel 3139 days agowww.csie.ntu.edu.tw - LIBSVM is an integrated software for support vector classification, (C-SVC, nu-SVC), regression (epsilon-SVR, nu-SVR) and distribution estimation (one-class SVM). It supports multi-class classification. Since version 2.8, it...pyGenomeTracks: Standalone program and library to plot beautiful genome browser tracks
By Neel 2675 days agogithub.com - pyGenomeTracks aims to produce high-quality genome browser tracks that are highly customizable. Currently, it is possible to plot: bigwig bed (many options) bedgraph links (represented as arcs) Hi-C matrices (if HiCExplorer is...Kubeflow: an open, community driven project to make it easy to deploy and manage an ML stack on...
By BioStar 2668 days agohttps://www.kubeflow.org/ - The Kubeflow project is dedicated to making deployments of machine learning (ML) workflows on Kubernetes simple, portable and scalable. Our goal is not to recreate other services, but to provide a straightforward way to deploy best-of-breed...Open Positions in Pasini’s lab
Computational Biologists Open to PhD-student and Post-doc candidates We are looking for wet and computational biologists to work on an ERC funded project in our laboratory located at the Department of Experimental Oncology of the European...dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
By Jit 3204 days agocsbl.bmb.uga.edu - dbCAN is a web server and DataBase for automated Carbohydrate-active enzyme ANnotation, funded by the BioEnergy Science Center of the DOE. Similar resources on the web include CAZy database and CAT. All...KOBAS: a web server for gene/protein functional annotation and functional gene set enrichment
By Jit 2696 days agokobas.cbi.pku.edu.cn - KOBAS 3.0 is a web server for gene/protein functional annotation (Annotate module) and functional gene set enrichment(Enrichment module). For Annotate module, it accepts gene list as input, including IDs or sequences, and generates annotations...plumber:An R package that converts your existing R code to a web API
By BioJoker 2551 days agohttps://www.rplumber.io/ - plumber allows you to create a REST API by merely decorating your existing R source code with special comments. Take a look at an example. # plumber.R #* Echo back the input #* @param msg The message to echo #* @get /echo function(msg=""){...GSP4PDB: a web tool to visualize, search and explore protein-ligand structural patterns
By Neel 2183 days agogdblab.com - GSP4PDB is a user-friendly and efficient application to search and discover new patterns of protein-ligand interaction. GSP4PDB is part of the services provided by the Bioinformatic Group of the University of...
