Jit
Enthusiast computational biologist with business dream !!!
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BlasR Mapping single molecule sequencing reads using Basic Local Alignment with Successive...
By Jit 2377 days agobix.ucsd.edu - BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion...ICGEB Bioinformatics Research Associate Vacancy
Research Associate Position at ICGEB, New Delhi with Dr. Amit Sharma Starting 15th July 2015, the position relates to a project specifically for in silico drug docking, screening, design, optimisation and linkage with active chemists....npScarf: real-time scaffolder using SPAdes contigs and Nanopore sequencing reads
By Shruti Paniwala 2358 days agojapsa.readthedocs.io - npScarf (jsa.np.npscarf) is a program that connect contigs from a draft genomes to generate sequences that are closer to finish. These pipelines can run on a single laptop for microbial datasets. In real-time mode, it can be integrated with simple...Research Scientist at DuPONT
Research Scientist Hyderabad, Telangana Job Description Job Description The Global Trait Discovery Informatics (GTDI) group located at the DuPont Knowledge Centre (DKC), Hyderabad, India is currently seeking applications for a highly...Hercules: a profile HMM-based hybrid error correction algorithm for long reads
By Jit 2288 days agogithub.com - Choosing whether to use second or third generation sequencing platforms can lead to trade-offs between accuracy and read length. Several studies require long and accurate reads including de novo assembly, fusion and structural variation detection....RA at CSIR-URDIP
CSIR - UNIT FOR RESEARCH AND DEVELOPMENT OF INFORMATION PRODUCTS (CSIR- URDIP) Adv. No. URDIP/ 15/2015 Opportunity for young Bioinformatics Professionals to make a career in the area of Intellectual Property CSIR has set up a Unit for...LoRMA: A tool for correcting sequencing errors in long reads
By Abhimanyu Singh 2271 days agogite.lirmm.fr - An error correction method that uses long reads only. The method consists of two phases: first, we use an iterative alignment-free correction method based on de Bruijn graphs with increasing length of k-mers, and second, the corrected reads are...Project Fellow at IHBT - Palampur, Himachal Pradesh
The Institute is working relentlessly on developing technologies for sustainable utilization of Himalayan bioresources, and in the area of tea, floriculture, bamboos and medicinal and aromatic plants. Looking at the mission of the Institute,the...Wtdbg2: a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore
By Neel 2228 days agogithub.com - Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanopore Technologies (ONT). It assembles raw reads without error correction and then builds the consensus from intermediate assembly output. Wtdbg2...Assistant Professor/ Professor at Central University of South Bihar
Central University of South Bihar (Established under Central Universities Act, 2009) BIT Campus, PO: B.V. College, Patna – 800 014 (Bihar) Employment Notice No. CUSB / 27 / Faculty / 2015 Appointment for Faculty Positions Applications...
