Jit
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Integrative RNA and ChIP-Seq analysis of regulatory T-cells
By Strand 3433 days agoIntegrative RNA and ChIP-Seq analysis of regulatory T-cellskallisto: a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data
By Jit 2181 days ago Comments (1)pachterlab.github.io - kallisto is a program for quantifying abundances of transcripts from bulk and single-cell RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for...Understanding RNA-Seq Normalization Methods: TPM vs. FPKM vs. CPM
By Neel 17 days agoChoosing the right normalization method depends on the specific objectives of your RNA-Seq analysis. TPM’s proportionality and robustness make it the preferred choice for most applications, while CPM serves well for differential expression...
Webinar on RNA-Seq Data Analysis on 28 Feb 2018
Last updated 2500 days ago by StrandStrand NGS is a biologist friendly NGS analysis tool that allows biologists to analyze their data using a very intuitive workflow for the analysis and visualization of RNA-Seq data. This webinar will give an overview of the workflow which includes...Workshop On Molecular Modeling and Dynamics Simulation Analyses
Workshop On Molecular Modeling and Dynamics Simulation Analyses August1-2, 2014 Organised By Centre of Excellence in Bioinformatics Bioinformatics Infrastructure Facility Department of Biochemistry University of...Stay-at-Home RevBayes Workshop
Stay-at-Home RevBayes Workshop Location: Anywhere (online-only event) Dates: 7/13, 2020 to 8/12, 2020 Instructors: Joëlle Barido-Sottani, Walker Pett, Josh Justison, Wade Dismukes, Luiza Fabreti, Tracy Heath, Jeremy M. Brown, Rosana...Arvados
By Martin Jones 3751 days agohttps://arvados.org/ - Arvados is a free and open source bioinformatics platform for genomic and biomedical data. User can Store | Organize | Compute | Share the data for free.
Randomness and Probability
By Jit 2971 days agoRandomness and Probability Randomness and probability are two differnet concepts: probaility is a measure (according to measure theory) which measures the randomness. Randomness is the object to be measured by probability. For example,...Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm)
By Abhimanyu Singh 2920 days agohttp://prodigal.ornl.gov/ - Prodigal (Prokaryotic Dynamic Programming Genefinding Algorithm) is a microbial (bacterial and archaeal) gene finding program developed at Oak Ridge National Laboratory and the University of Tennessee. Key features of Prodigal...Harvest
By Jit 2887 days agoharvest.readthedocs.io - Harvest is a suite of core-genome alignment and visualization tools for quickly analyzing thousands of intraspecific microbial genomes, including variant calls, recombination detection, and phylogenetic trees. Tools Parsnp - Core-genome...
