rstudio.github.io - Leaflet is one of the most popular open-source JavaScript libraries for interactive maps.
Features
Interactive panning/zooming
Compose maps using arbitrary combinations of:
Map...
cosmos.hms.harvard.edu - COSMOS, our Python-based management system for implementing large-scale parallel workflows focusing on, but not restricted to, large-scale short-read "NGS" sequencing data is open-access published via Advance Access in Bioinformatics (Gafni et al....
milkweedgenome.org - Some of the useful bioinformatics scripts.
For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly.
http://milkweedgenome.org/?q=scripts
readthedocs.org - Bipype is a very useful program, which prepare a lot of types of bioinformatics analyses. There are three input options: amplicons, WGS (whole genome sequences) and metatranscriptomic data. If amplicons are input data, then bipype does...
Subprocess is one of simplest way of running linux command from within python code
Example:
if you want to run fastqc for QC of fastq file:
from subprocess import Popen,PIPE,call
p=Popen(["fastqc","-f","fastq","-o",...
https://seq-lang.org -
Seq is a programming language for computational genomics and bioinformatics. With a Python-compatible syntax and a host of domain-specific features and optimizations, Seq makes writing high-performance genomics software as easy as writing...