Jit
Enthusiast computational biologist with business dream !!!
Our Sponsors
Related items
SeQuiLa-cov: A fast and scalable library for depth of coverage calculations
By Jit 1803 days agoacademic.oup.com - The Docker image is available at https://hub.docker.com/r/biodatageeks/. Supplementary information on benchmarking procedure as well as test data are publicly accessible at the project documentation...Venn Diagrams on R Studio
By Jitendra Prajapati 3132 days ago Comments (2)rstudio-pubs-static.s3.amazonaws.com - First step: Install & load “VennDiagram” package. # install.packages('VennDiagram') library(VennDiagram) Second step: Load data Add filepath if “catdoge.csv” is not in working-directory. d <-...Sushi: An R/Bioconductor package for visualizing genomic data
By Jit 3004 days agowww.bioconductor.org - Sushi: An R/Bioconductor package for visualizing genomic dataABACAS
By Surabhi Chaudhary 2835 days agoabacas.sourceforge.net - ABACAS is intended to rapidly contiguate (align, order, orientate) , visualize and design primers to close gaps on shotgun assembled contigs based on a reference sequence. It uses MUMmer to find alignment positions and identify syntenies of assembly...gbtools: Interactive Visualization of Metagenome Bins in R
By Jit 2797 days agojournal.frontiersin.org - We have developed gbtools, a software package that allows users to visualize metagenomic assemblies by plotting coverage (sequencing depth) and GC values of contigs, and also to annotate the plots with taxonomic information. Different sets of...karyoploteR: plot whole genomes with arbitrary data
By Abhimanyu Singh 2484 days agobernatgel.github.io - karyoploteR is an R package to create karyoplots, that is, representations of whole genomes with arbitrary data plotted on them. It is inspired by the R base graphics system and does not depend on other graphics packages. The aim of karyoploteR...shinyCircos: an R/Shiny application for interactive creation of Circos plot
By Jit 1749 days ago150.109.59.144 - shinyCircos, a graphical user interface for interactive creation of Circos plot. shinyCircos can be easily installed either on computers for personal use or on local or public servers to provide online use to the community. Furthermore, various...Collection of Graph Visualization tools !
By Neel 666 days agopangenome.github.io - Standard approaches to genome inference and analysis relate sequences to a single linear reference genome. This is efficient but has a fundamental problem: Differences from this reference are hard to observe and describe in a coherent way. Variation...
