Jitendra Narayan
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Pacbio Long Reads Compatible Software and Tools
By Archana Malhotra 3279 days agogithub.com - The following software packages are known to be compatible with PacBio® data, in addition to PacBio's own SMRT® Analysis suite. All packages are believed to be open source or freely available for non-commercial use. See the individual...EyeChrom: Visualizing Chromosome Count Data From Plants
By Jit 2615 days agoeyechrom.com - It's goal is to show chromosmal data per genus. Select the genus, and the plot will show the records found for it in the Chromosome Counts Database. note: Report an issue via Gihub: github.com/roszenil/CCDBcurator and...sockeye
By Jit 3305 days agowww.bcgsc.ca - This sockeye software uses the Ensembl database project to import sequence and annotation information from several eukaryotic species. A user can additionally import their own custom sequence and annotation data. Individual annotation objects...InfoGenomeR: Integrative reconstruction of cancer genome karyotypes
By Jit 1767 days agogithub.com - InfoGenomeR is the Integrative Framework for Genome Reconstruction that uses a breakpoint graph to model the connectivity among genomic segments at the genome-wide scale. InfoGenomeR integrates cancer purity and ploidy, total CNAs, allele-specific...
Is reference genome necessary for gene expression study in transcriptome sequencing or for variant discovery in genome sequencing?
Rahul Agarwal 4616 days agoCancer's origins revealed
By Jitendra Narayan 4587 days agoResearchers discover the genetic imprints and signatures left by DNA-damaging processes that lead to cancer.An entire genome written in lab
By Rahul Nayak 4516 days agoResearchers rewrite an entire genome — and add a healthy twistDNA Replication Process [3D Animation]
By Rahul Nayak 4319 days agoSee an organised list of all the animations: http://doctorprodigious.wordpress.com/hd-animations/EAGER
By Jit 3374 days agogithub.com - The automated reconstruction of genome sequences in ancient genome analysis is a multifaceted process. EAGER encompasses both state-of-the-art tools for each step as well as new complementary tools tailored for ancient DNA data within a single...
