Poonam Mahapatra
Bioinformatics Researcher
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KisSplice
By Jit 3628 days agokissplice.prabi.fr - KisSplice is a software that enables to analyse RNA-seq data with or without a reference genome. It is an exact local transcriptome assembler that allows to identify SNPs, indels and alternative splicing events. It can deal with an arbitrary number...
Cheatsheet for Linux !!
Last updated 3683 days ago by JitLinux Commands Cheat Sheet File System ls — list items in current directory ls -l — list items in current directory and show in long format to see perimissions, size, an modification...A5-miseq
By Jit 3626 days agosourceforge.net - _A5-miseq_ is a pipeline for assembling DNA sequence data generated on the Illumina sequencing platform. This README will take you through the steps necessary for running _A5-miseq_. Point to note: There are many situations where A5-miseq is not...Kraken: ultrafast metagenomic sequence classification using exact alignments
By Jit 3678 days ago Comments (1)www.ncbi.nlm.nih.gov - Kraken is an ultrafast and highly accurate program for assigning taxonomic labels to metagenomic DNA sequences. Previous programs designed for this task have been relatively slow and computationally expensive, forcing researchers to use faster...Machine Learning !!!
By Gudiya Pal 3674 days agowww.r2d3.us - In machine learning, computers apply statistical learning techniques to automatically identify patterns in data. These techniques can be used to make highly accurate predictions. Keep scrolling. Using a data set about homes, we will...Fancy Oneliner for Bioinformatics !!
By Poonam Mahapatra 3668 days agouserweb.eng.gla.ac.uk - This webpage lists some of the one-liners that we frequently use in metagenomic analyses. You can click on the following links to browse through different topics. You can copy/paste the commands as they are in your terminal screen, provided you...BINC exam preparation tips !!
By Jit 3659 days agoThese are just a scant few of the common questions asked by bioinformatics students as they ready themselves for the next exam sittingMEGAN6
By Neel 3650 days ago Comments (1)ab.inf.uni-tuebingen.de - Microbiome analysis using a single application MEGAN6 is a comprehensive toolbox for interactively analyzing microbiome data. All the interactive tools you need in one application. Taxonomic analysis using the NCBI taxonomy or a customized...Research Associate (Computer Sciences) recruitment in National Bureau of Plant Genetic Resources
Research Associate (Computer Sciences) recruitment in National Bureau of Plant Genetic Resources Project: Indo-UK Centre for improvement of Nitrogen use efficiency in wheat Dr. Soma S. Marla, Pr. Scientist (Bioinformatics), Division of Genomic...JRF Bioinformatics at DPU, India
Advertisement for position of “JRF (Junior Research Fellow)” on DST research project “Molecular modeling and docking studies on Deguelin and its derivatives with cell cycle arrest, apoptosis and anti-angiogenesis pathway proteins in cancer cell...
