Comment on "Genome assembly tutorial "Genome Assembly for short and long reads""
Do it yourself guide to genome assembly https://academic.oup.com/bfg/article/15/1/1/17418421574 days ago
Comment on "Bioinformatics tools developed for Oxford Nanopore data analysis !"
Basic commands for genome assembly https://raw.githubusercontent.com/rrwick/Long-read-assembler-comparison/master/supplementary_figures/Fig_S04_commands.png1592 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
Benchmark (or "High-confidence") variant ca...able for GRCh37 and GRCh38 under each genome at ftp://ftp-trace.ncbi....tablish best practices for using GIAB genomes for benchmarking, we have wo...B:Benchmark small variants for 7 GIAB genomesOlder benchmark small variant...1602 days ago
Comment on "Genome in a Bottle (GIAB) Consortium"
GitHub https://github.com/genome-in-a-bottle1602 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformcs software are published by Genome Biology - Software section https://genomebiology.biomedcentral.com/submission-guidelines/preparing-your-manuscript/software1610 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics Journals Ranks from Google Scholar 1: Bio...p;(4.780 :: 5.081) Frontiers in Genetics G3-Genes Genomes Genetics (3.198 :: 3.50...Genes (3.242) Genetics (5.963 :: 5.241) Genome (1.424 :: 1.669) Genome...1885 days ago
Comment on "Assembly tutorial PPT"
Genome assembly tutorial https://astrobiomike.github.io/genomics/de_novo_assembly2005 days ago
Comment on "Tools for Searching Repeats And Palindromic Sequences"
I wrote a tools "Palindromer" to find palindromes in whole genome sequences. You can try https://github.com/jnarayan81/Palindromer . I am happy to improve it, if any features are requested.2056 days ago
Comment on "Long read assembly workshop !"
Long reads base bacterial genome assembly https://inf-biox121.readthedocs.io/en/2016/Assembly/practicals/07_Assembly_using_minasm+racon.html2082 days ago
Comment on "Long read assembly workshop !"
Bacterial genome assembly tutorial http://evomics.org/learning/assembly-and-alignment/2017-assembly-lab/2082 days ago