Comment on "Benchmarking Perl Module !"
...done using the Perl Benchmark module, which provides a simple and standardized way to measure and compare the performance of Perl code. Here is a quick guide to benchmarking a Perl...457 days ago
Comment on "A quick guide to Phred scaling"
...nting the quality scores of sequencing reads. It is used to quantify the probability of an error in each base call in a sequencing read. Here is a quick guide to Phred scaling:...457 days ago
Comment on "Run miniasm assembler on nanopore reads !"
Here’s the quick and dirty of what was done: 1 Run minimap: This uses a pre-built set of defaults (the ava-pb in the code below) for analyzing PacBio data. Mi...2209 days ago
Comment on "SPAdes hybrid genome assembly"
...es_hybrid/contigs.fasta samtools faidx SPAdes_hybrid/contigs.fasta NODE_1_length_4620446_cov_135.169_ID_22238 > single_contig.fa Finally, a quick comparison to the reference:...2216 days ago
Comment on "Perl and BioPerl Tutorials"
A Quick, Painless Introduction to the Perl Scripting Language http://heather.cs.ucdavis.edu/~matloff/Perl/PerlIntro.pdf3306 days ago
Comment on "R and Bioconductor Tutorial"
A quick tutorial on R https://github.com/jrherr/quick_basic_R_tutorial/blob/master/basic_R_tutorial.R3649 days ago
Comment on "List of Bioinformatics Vacancy, Jobs, Opportunity websites"
...amp;displaySuburb=&seoSuburb=&isAreaUnspecified=false&location=&area=&nation=3000&sortMode=KeywordRelevance&searchFrom=quick&searchType= is the gem.3673 days ago
Comment on "List of popular bioinformatics software/tools"
SAMtool quick tutorial at http://davetang.org/wiki/tiki-index.php?page=SAMTools http://samtools.sourceforge.net/samtools.shtml3690 days ago
Comment on "Five unique traits of effective computational biologist"
...mother! PLoS Comput Biol9(10): e1003305. [link] Noble WS (2009) A Quick Guide to Organizing Computati...ormatics. 18(12):1551-2. [link] Huttenhower C, Hofmann O (2010) A Quick Guide to Large-Scale Genomic...3872 days ago
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