Results for "B"
Blogs
Tools for Sequence translation !
BOrf - https://github.com/betsig/borf CodAn - https://github.com/pedronachtigall/CodAn EMBOSS-Sixpack - https://www....ate - http://hmmer.org/, https://github.com/EddyRiva...er) PLASS - https://github.com/soedinglab/plass Prodiga...593 days ago
- barrnap - https://github.com/tseemann/barrnap CPAT - https://github.com/lig...pat, http://lilab.research.bcm.edu/ (web server) CPC...ttp://cpc2.gao-lab.org/ (web server) Infernal - ...rg/en/latest/index.html SILVA - https://www.arb-silv...
593 days ago
Tools for Differential expression analysis
apeglm - https://bioconductor.org/packages/release/bioc/html/apeglm.html ashr -...://github.com/stephens999/ashr, https://cran.r-project.org/...ioconductor.org/packages/release/bioc/html/consensusDE.html DES...genbioconductor/html/limma.html https://bioconductor....593 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3JldKoA0zw ...quencing projects successful https://academic.oup.com/gi...66389921002300 4. A Reproducible Data Analysis Workflow with...cible Computational Research http://journals.plos.org/pl...590 days ago
- ..., predicts the 3D structure of a protein based on its amino acid sequence. It looks to be a 50-year-old answer to the...ore updates like this follow us on: Facebook:https://www.facebook.com/R...Visit us at: https://www.rasalsi.com ...
587 days ago
Bioinformatics tools to explore SSRs in genomes !
There are several bioinformatics tools that can be used to explore Simple Sequence...ISA: MISA (MIcroSAtellite) is a web-based tool that can identify...SSR Locator: SSR Locator is a web-based tool that identifies SS...SRs. Primer3: Primer3 is a web-based tool that designs PCR p...474 days ago
Chromosome breakpoint - a breakup to remember
...ocation where a chromosome is broken and rearranged. Chromosome breakage can occur spontaneousl...l resulting from a chromosome breakpoint can have important c...omosome rearrangements caused by breakpoints. In a translocat...r. In conclusion, chromosome breakpoints are important genet...474 days ago
Common methods to discover tandem repeats
...tool that identifies tandem repeats in DNA sequences. It is available for free download and can be used on both nucleotide and...fies any tandem repeats that match those in the database. PCR-based methods: Polymerase chain...472 days ago
Common steps for reads mapping !
...read mapper: There are many read mappers available, such as BWA, Bowtie, and HISAT2. Choose.... Prepare the read data: The reads should be in a format that is compatib...the mapping, such as the mapping rate, the number of mapped reads, and the ma...472 days ago
Steps to find palindrome in genomes !
...f nucleotides that read the same backward as forward. They can be present in genomes and have...ng algorithms. This approach can be useful for discovering simpl...s and cleave DNA at these sites. By digesting the genome with th...ndromic sequences in genomes can be accomplished using a variety...472 days ago
