Results for "TE"
Blogs
Tools for Sequence translation !
...ck - https://www.ebi.ac.uk/Tools/st/emboss_sixpack/ esl-translate - http://hmmer.org/...ps://github.com/EddyRivasLab/easel GeneMarkS-T - http://exon.gatech.edu/GeneMark/license_downlo...577 days ago
- ...sLab/infernal NCBI RefSeq - https://www.ncbi.nlm.nih.gov/refseq/ Rfam - http://rfam.xfam.org/, https://docs.rfam.org/en/latest/index.html SILVA -&nb...
577 days ago
Tools for Differential expression analysis
...kages/release/bioc/html/apeglm.html ashr - https://github.com/stephens999/ashr, https://cr...ase/bioc/html/RUVSeq.html SARTools - https://github.com/PF2-pasteur-fr/SARTools tximport ...577 days ago
Interesting Bioinformatics Resources !
...outube.com/watch?v=s3JldKoA0zw This two minute video will change your mind o...Life Sciences https://www.cell.com/cell-systems/fulltext/S2405-4712(18)3014...com/watch?v=7gYIs7uYbMo) highly recommended. 7. Ten Simple Rules for Reproducibl...574 days ago
- DeepMind’s artificial intelligence system AlphaFold2, predicts the 3D structure of a protein based on its amino acid sequence. I...-year-old answer to the problem of protein folding.To read more: https...ttps://www.facebook.com/RASALSI/ Twitter: https://twitter.com/rasalsi...
571 days ago
Bioinformatics tools to explore SSRs in genomes !
...Repeats (SSRs), which are also known as microsatellites. Here are a few examples:..., compound, and imperfect SSRs, and can also filter out low complexity regions....Rs in various organisms. QDD: QDD (Quick Detection of Duplication) is a sof...458 days ago
Chromosome breakpoint - a breakup to remember
...ses. The rearrangement of genetic material resulting from a chromoso...reakpoints can occur in two ways: interstitial or terminal. Intersti...uplication or deletion of genetic material. Chromosome breakpoints...alanced translocations can be inherited without any apparent phenoty...458 days ago
Common methods to discover tandem repeats
...ats are DNA sequences that are repeated in a contiguous manner in the genome. These sequences are often used as genetic markers and...n be used on both nucleotide and protein sequences. The tool uses a...(PCR) can be used to amplify and detect tandem repeats in genomic D...456 days ago
Common steps for reads mapping !
...lysis. Here are some general steps to follow for mapping reads...ose a mapper that is appropriate for your type of data and res...he data, it may need to be filtered or trimmed before mapping....ecessary. This can include filtering reads based on quality, r...456 days ago
Steps to find palindrome in genomes !
...ence directly for palindromic sequences using pattern matching tools, such as reg...nce against itself and examining the diagonal patterns that emerge. Palindromic r...eneration sequencing: High-throughput sequencing technologies, such as PacBio and...456 days ago
