Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adap...lling Read alignment (Bowtie 2) Sort and index alignments (SAMtools)...vel QC (picard, SAMtools) Genome-wide and amplicon coverage QC plots (m...n) Clade assignment, mutation calling and se...929 days ago
Online resources on must-read papers in evolutionary biology, for a literature club
1. *Nick Barton:* - The textbook "Evolution" by Nick Barto...riation 1a. Lewontin, R. C., and J. L. Hubby. 1966. A molecular ap...ons. II. Amount of variation and degree of heterozygosity in natur...Genetic Landscape of a Cell. Science. Speciation 1. Coyne,...4. *Joshka Kaufmann and Le...729 days ago
Must read paper and books in evolution biology !
1. *Nick Barton:* - The textbook "Evolution" by Nick Barto...riation 1a. Lewontin, R. C., and J. L. Hubby. 1966. A molecular ap...ons. II. Amount of variation and degree of heterozygosity in natur...Genetic Landscape of a Cell. Science. Speciation 1. Coyne,...4. *Joshka Kaufmann and Le...629 days ago
Interesting Bioinformatics Resources !
1. a reproducible workflow. https://www.youtube.com/watch?v=s3...;https://academic.oup.com/gigascience/article/6/11/gix100/4557140?l...publication https://www.sciencedirect.com/science/article...w with R Markdown, Git, Make, and Docker https://psyarxiv....Dr.Keith A. Baggerly from MD Anders...593 days ago
Free Books on Machine Learning and Artificial Intelligent !
An Introduction to Statistical LearningThis book provides a broad and less technical treatment of key t...LRv2_website.pdf Python Data Science HandbookYou’ll learn how to...//jakevdp.github.io/PythonDataScienceHandbook/ Dive into Deep...knowledge of machine learning and de...468 days ago