Results for "CA"

Blogs

  • Setting python version as default on Linux

    ...t as the default. If it is not, choose it to be the default. From now on, running python should start version 2.6. Undoing These Changes In some cases (e.g., installing or updat...

    2112 days ago

  • List of motif discovery tools !

    ...conjectured to have, a biological significance. For proteins, a sequence...well as interior inaccessible cavities, for proteins and other...Specificity Hot Spot Identification web server Design protei...by machine LEarning Web application for predicting protein di...

    2035 days ago

  • How to set up SSH on Ubuntu 18.04

    ...ncomment port 22Uncomment HostKey /etc/ssh/ssh_host_rsa_keyUncomment AuthorizedKeysFile .ssh/authorized_keys .ssh/authorized_keys2Set pubkey authentication to "yes" sudo systemct...

    2033 days ago

  • Understating pacbio reads name !

    ...─┘└10┘ "m" = movie Time of Run Start (yymmdd_hhmmss) Instrument Serial Number SMRT Cell Barcode Set Number (a.k.a. "Look Number". Deprecated field, used in earlier ver...

    2032 days ago

  • CANU genome assembly parameters !

    ...appropriate parameters to run Canu and run it. The assembly will take about an hour. You can use two cores (parameter&nbs...nt to smash them together, we can alternate the error correcti...tools. More at https://canu.readthedocs.io/en/latest/fa...

    1987 days ago

  • Thank You Email After Bioinformatics Interview !

    ...e them to contact you if they have any questions/concerns, or need clarification on anything discussed Fi...ucceed and excel in! I’m looking forward to hearing any updates you can share, and don’t hesit...

    1893 days ago

  • List of tools frequently used while genome assembly

    List of tools frequently used while genome assembly: I have used the following assemblers Spades (v. 3.10.1) CANU (v. 1.6) Unicycler (v. v0.4.1) Miniasm (...

    1972 days ago

  • Understanding reads mapping and flags !

    ...nment: An alignment of a read that cannot be represented as a linear alignment. Typically, one of the linear alignme...p;in RNA-seq. In short, chimeric reads can be split in to two or more p...read may map ambiguously to multiple locations, e.g. due to repeats.&nb...

    1879 days ago

  • AWK for beginners !

    ...implied loop and AWK automatically reads and parses each # r...) { print "String concatenation is done" " with a ser...ne arguments is in a variable called ARGC print ARGC;...# Whoa, no argument! That's because print has a default argume...

    1878 days ago

  • Introduction to Bioinformatics

    ...bioinformatics is a course for biologists and clinicians that would like to learn more about the way bioinformatics is used in healthcare, biotech and pharmaceuitcal industry as well as basic re...

    1838 days ago